RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 ZMYND11Q15326 602 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ATG16L2Q8NAA4 619 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 SETD9Q8NE22 299 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 SHCBP1Q8NEM2 672 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 SH3BP4Q9P0V3 963 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 HCN4Q9Y3Q4 1203 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ARHGEF33A8MVX0 844 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 PDHXO00330 501 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 CLIC2O15247 247 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 TIMM44O43615 452 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 GSTM1P09488 218 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 THRAP10827 490 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 GJA1P17302 382 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 YWHAQP27348 245 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 TTKP33981 857 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 LRRC63Q05C16 580 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 TAF5Q15542 800 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 HLFQ16534 295 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 TNNI3KQ59H18 835 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 PYHIN1Q6K0P9 492 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 TRIM65Q6PJ69 517 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 RNF19BQ6ZMZ0 732 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ZNF467Q7Z7K2 595 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-216ENST00000527467 FAM83AQ86UY5 434 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 C3orf20Q8ND61 904 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 LPAR1Q92633 364 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 HPS1Q92902 700 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 RNF25Q96BH1 459 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-216ENST00000527467 MROH8Q9H579 483 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 EFCAB1Q9HAE3 211 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 SP110Q9HB58 689 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 CUEDC1Q9NWM3 386 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-216ENST00000527467 STAP1Q9ULZ2 295 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 DUSP12Q9UNI6 340 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 FPGT-TNNI3KV9GXZ4 949 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ZMYM6O95789 1325 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ADM5C9JUS6 153 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 RB1P06400 928 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ALAS1P13196 640 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ATP6V1B2P21281 511 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 CPA2P48052 419 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 SPIRE1Q08AE8 756 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 DLG1Q12959 904 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 LRRC41Q15345 812 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 KCNT1Q5JUK3 1230 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 FKBP1CQ5VVH2 108 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 B3GNT6Q6ZMB0 384 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-216ENST00000527467 PALB2Q86YC2 1186 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 POC5Q8NA72 575 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 PIK3C3Q8NEB9 887 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 SH3TC2Q8TF17 1288 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 XAGE2Q96GT9 111 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ATXN7L3BQ96GX2 97 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 YIPF2Q9BWQ6 316 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 WNT8AQ9H1J5 351 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 MFSD1Q9H3U5 465 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 PCIF1Q9H4Z3 704 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 TASP1Q9H6P5 420 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 PLGRKTQ9HBL7 147 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 STARD7Q9NQZ5 370 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 SEPT9Q9UHD8 586 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-216ENST00000527467 MAN1B1Q9UKM7 699 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 GSTK1Q9Y2Q3 226 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 PKP3Q9Y446 797 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 KDM6AO15550 1401 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-216ENST00000527467 A0A087WXM4 84 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 MDM4O15151 490 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 TBC1D12O60347 775 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 KRT36O76013 467 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ALOX5P09917 674 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 STAG3L1P0CL83 205 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 MYL12AP19105 171 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 FGFR4P22455 802 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 SDC4P31431 198 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ZAP70P43403 619 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 CASP5P51878 434 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 S100A12P80511 92 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 C4orf46Q504U0 113 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 PRPF38BQ5VTL8 546 aaKnown RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 BNC2Q6ZN30 1099 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 EIF3MQ7L2H7 374 aaKnown RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 CHSY1Q86X52 802 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 SCUBE1Q8IWY4 988 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 SAMSN1Q9NSI8 373 aaKnown RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 MYRFQ9Y2G1 1151 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 LRCH1Q9Y2L9 728 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 SPEF1Q9Y4P9 236 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 FAM220BPB1ANY3 271 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 BTBD18B2RXH4 712 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 HAT1O14929 419 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 MYL12BO14950 172 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 TSPAN19P0C672 248 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 ALOX15P16050 662 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 CDH3P22223 829 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 IL12AP29459 219 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 SPP2Q13103 211 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 TTLL4Q14679 1199 aa7.47□□□□□ -1.21
CTNND1-216ENST00000527467 USP10Q14694 798 aaKnown RBP7.47□□□□□ -1.21
CTNND1-216ENST00000527467 GSTA3Q16772 222 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms