RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 FAM200BP0CF97 657 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 PLA2G4AP47712 749 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 RGS7P49802 495 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 SLC8B1Q6J4K2 584 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 SPATA2LQ8IUW3 424 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-203ENST00000527275 SMARCD1Q96GM5 515 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 CLSTN3Q9BQT9 956 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 PBX4Q9BYU1 374 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 RWDD3Q9Y3V2 267 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 BACE2Q9Y5Z0 518 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 SCINQ9Y6U3 715 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 PLXNA4Q9HCM2 1894 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-203ENST00000527275 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-203ENST00000527275 PIK3R2O00459 728 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 SART1O43290 800 aaKnown RBP19.73■□□□□ 0.75
SMPD1-203ENST00000527275 AP1G2O75843 785 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 OR1D2P34982 312 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 SLC1A1P43005 524 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 MAP3K7CLP57077 242 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 GPR17Q13304 367 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 NFE2Q16621 373 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-203ENST00000527275 GLIPR1L2Q4G1C9 344 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 C4orf50Q6ZRC1 276 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 IFT20Q8IY31 132 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 GSPT2Q8IYD1 628 aaKnown RBP19.73■□□□□ 0.75
SMPD1-203ENST00000527275 ATAD1Q8NBU5 361 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 PLVAPQ9BX97 442 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 OXCT2Q9BYC2 517 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-203ENST00000527275 PLEKHA4Q9H4M7 779 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 MRPL17Q9NRX2 175 aaKnown RBP19.73■□□□□ 0.75
SMPD1-203ENST00000527275 PARVAQ9NVD7 372 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 ABI2Q9NYB9 513 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-203ENST00000527275 MYO7AQ13402 2215 aa19.73■□□□□ 0.75
SMPD1-203ENST00000527275 CALB1P05937 261 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 SETSIPP0DME0 302 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 CYP2F1P24903 491 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 SLC8A3P57103 927 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 GUCY2DQ02846 1103 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 CASP8Q14790 479 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 CYP4A22Q5TCH4 519 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 AADACL2Q6P093 401 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 PIGZQ86VD9 579 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 SMOQ99835 787 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 DDX47Q9H0S4 455 aaKnown RBP19.72■□□□□ 0.75
SMPD1-203ENST00000527275 ZBP1Q9H171 429 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 SYNCQ9H7C4 482 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 EPB41L5Q9HCM4 733 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 GDF3Q9NR23 364 aa19.72■□□□□ 0.75
SMPD1-203ENST00000527275 CAPN15O75808 1086 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 GABBR2O75899 941 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 PYGMP11217 842 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 TNFRSF8P28908 595 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 BMP8BP34820 402 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 RWDD2BP57060 319 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 ROR1Q01973 937 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 TAP1Q03518 808 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 SEL1L2Q5TEA6 688 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 ZMIZ2Q8NF64 920 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 STK32AQ8WU08 396 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 STK39Q9UEW8 545 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 PTPRDP23468 1912 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 WDR27A2RRH5 827 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 E5RJQ4 531 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 C5orf67F2Z3F1 127 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 XPO1O14980 1071 aaKnown RBP19.71■□□□□ 0.75
SMPD1-203ENST00000527275 PROSCO94903 275 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 ERBB2P04626 1255 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 CTSAP10619 480 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 RNF19BQ6ZMZ0 732 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 ADAT2Q7Z6V5 191 aaKnown RBP19.71■□□□□ 0.75
SMPD1-203ENST00000527275 TDHQ8IZJ6 230 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 FEZF2Q8TBJ5 459 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 C18orf8Q96DM3 657 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 SLC4A5Q9BY07 1137 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 CSNK1G1Q9HCP0 422 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 NR2E1Q9Y466 385 aa19.71■□□□□ 0.75
SMPD1-203ENST00000527275 CSPG5O95196 566 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 DNAJB1P25685 340 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 TMC7Q7Z402 723 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 TMEM110Q86TL2 294 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 SPPL3Q8TCT6 385 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 AENQ8WTP8 325 aaKnown RBP19.7■□□□□ 0.74
SMPD1-203ENST00000527275 FUBP3Q96I24 572 aaKnown RBP eCLIP19.7■□□□□ 0.74
SMPD1-203ENST00000527275 TGS1Q96RS0 853 aaKnown RBP19.7■□□□□ 0.74
SMPD1-203ENST00000527275 SLITRK6Q9H5Y7 841 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 PCDHB5Q9Y5E4 795 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 GOLGA6L10A0A0M3HER8 536 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 ZSCAN5CA6NGD5 496 aaPredicted RBP19.7■□□□□ 0.74
SMPD1-203ENST00000527275 LILRB3O75022 631 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 TNNT3P45378 269 aaPredicted RBP19.7■□□□□ 0.74
SMPD1-203ENST00000527275 ERVFC1P60507 584 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 TTC9BQ8N6N2 239 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 CCDC26Q8TAB7 109 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 POF1BQ8WVV4 589 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 LZTS1Q9Y250 596 aa19.7■□□□□ 0.74
SMPD1-203ENST00000527275 MTMR11A4FU01 709 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 F8VP50 259 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 VNN2O95498 520 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 RB1P06400 928 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms