RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 DUSP9Q99956 384 aaKnown RBP14.21□□□□□ -0.13
CAPN1-207ENST00000527189 LINC00597Q9H2U6 94 aa14.21□□□□□ -0.13
CAPN1-207ENST00000527189 FBXO44Q9H4M3 255 aa14.21□□□□□ -0.13
CAPN1-207ENST00000527189 FAM124BQ9H5Z6 455 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-207ENST00000527189 FBRSL1Q9HCM7 1045 aaKnown RBP14.21□□□□□ -0.13
CAPN1-207ENST00000527189 TMEM8AQ9HCN3 771 aa14.21□□□□□ -0.13
CAPN1-207ENST00000527189 GMEB2Q9UKD1 530 aa14.21□□□□□ -0.13
CAPN1-207ENST00000527189 WNT6Q9Y6F9 365 aa14.21□□□□□ -0.13
CAPN1-207ENST00000527189 GPR179Q6PRD1 2367 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 CETN3O15182 167 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 HRO43593 1189 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 STX10O60499 249 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 LRP3O75074 770 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 AP1G2O75843 785 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 EGFP01133 1207 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 ZDHHC11BP0C7U3 371 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 GCLMP48507 274 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 FNTBP49356 437 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 PPP3CAQ08209 521 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 SIM2Q14190 667 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-207ENST00000527189 HECTD3Q5T447 861 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 KRT39Q6A163 491 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 SCARA5Q6ZMJ2 495 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 TTC39CQ8N584 583 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 TTC16Q8NEE8 873 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 FBXO32Q969P5 355 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 TIGD1Q96MW7 591 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 GDPD2Q9HCC8 539 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 TBC1D14Q9P2M4 693 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 HOOK1Q9UJC3 728 aaKnown RBP14.2□□□□□ -0.14
CAPN1-207ENST00000527189 SLC8A2Q9UPR5 921 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 CPQQ9Y646 472 aa14.2□□□□□ -0.14
CAPN1-207ENST00000527189 E2F8A0AVK6 867 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 PRR5-ARHGAP8B1AHC4 643 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 RNF40O75150 1001 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 RETP07949 1114 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 SLC5A3P53794 718 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 ARHGAP8P85298 464 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 PUM1Q14671 1186 aaKnown RBP eCLIP14.19□□□□□ -0.14
CAPN1-207ENST00000527189 ZNF658Q5TYW1 1059 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-207ENST00000527189 SPOPLQ6IQ16 392 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 ELOA2Q8IYF1 753 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-207ENST00000527189 ENGASEQ8NFI3 743 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 SCAMP5Q8TAC9 235 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 SPATA20Q8TB22 786 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 SLC2A14Q8TDB8 520 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 TAS1R2Q8TE23 839 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 OTUB2Q96DC9 234 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 HNRNPABQ99729 332 aaKnown RBP14.19□□□□□ -0.14
CAPN1-207ENST00000527189 NT5C1AQ9BXI3 368 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 PNPLA8Q9NP80 782 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 KRT82Q9NSB4 513 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 C2orf42Q9NWW7 574 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 DLL3Q9NYJ7 618 aa14.19□□□□□ -0.14
CAPN1-207ENST00000527189 CHORDC1Q9UHD1 332 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-207ENST00000527189 FASNP49327 2511 aaKnown RBP14.18□□□□□ -0.14
CAPN1-207ENST00000527189 FRYQ5TBA9 3013 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 COCHO43405 550 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 FOXD2O60548 495 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-207ENST00000527189 SMC2O95347 1197 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 FAM200BP0CF97 657 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 TRIM49P0CI25 452 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 TRIM49CP0CI26 452 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 EPB41P11171 864 aaKnown RBP14.18□□□□□ -0.14
CAPN1-207ENST00000527189 MBL2P11226 248 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-207ENST00000527189 EIF2DP41214 584 aaKnown RBP14.18□□□□□ -0.14
CAPN1-207ENST00000527189 LMNB2Q03252 620 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 DMWDQ09019 674 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 IFRD2Q12894 506 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-207ENST00000527189 PNOCQ13519 176 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 SYT13Q7L8C5 426 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 FILIP1Q7Z7B0 1213 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 C12orf29Q8N999 325 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 ZMIZ2Q8NF64 920 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 ACDQ96AP0 544 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 ELMO3Q96BJ8 720 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 CYFIP2Q96F07 1278 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 SMOQ99835 787 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 NIF3L1Q9GZT8 377 aa14.18□□□□□ -0.14
CAPN1-207ENST00000527189 APOBEC3GQ9HC16 384 aaKnown RBP14.18□□□□□ -0.14
CAPN1-207ENST00000527189 TLR8Q9NR97 1041 aaKnown RBP14.18□□□□□ -0.14
CAPN1-207ENST00000527189 ZZEF1O43149 2961 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 A0A0A0MRY4 1105 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 CILPO75339 1184 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 BEST1O76090 585 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 CCDC130P13994 396 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 TGM1P22735 817 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 PRCPP42785 496 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 MAP3K7CLP57077 242 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 FKBP3Q00688 224 aaKnown RBP14.17□□□□□ -0.14
CAPN1-207ENST00000527189 DHCR24Q15392 516 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 HEATR6Q6AI08 1181 aaKnown RBP14.17□□□□□ -0.14
CAPN1-207ENST00000527189 PKN3Q6P5Z2 889 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 PRR23BQ6ZRT6 265 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 FBXL13Q8NEE6 735 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 LOXL4Q96JB6 756 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 TSG101Q99816 390 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 RAB20Q9NX57 234 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 SMPD4Q9NXE4 827 aa14.17□□□□□ -0.14
CAPN1-207ENST00000527189 CFAP97Q9P2B7 532 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms