RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 TRUB2O95900 331 aaKnown RBP21.47■■□□□ 1.03
SMCO4-203ENST00000526869 EN2P19622 333 aaPredicted RBP21.47■■□□□ 1.03
SMCO4-203ENST00000526869 MATKP42679 507 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 YWHAZP63104 245 aaKnown RBP21.47■■□□□ 1.03
SMCO4-203ENST00000526869 SLC39A12Q504Y0 691 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 STRADAQ7RTN6 431 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 C12orf50Q8NA57 414 aaPredicted RBP21.47■■□□□ 1.03
SMCO4-203ENST00000526869 BCL7CQ8WUZ0 217 aaPredicted RBP21.47■■□□□ 1.03
SMCO4-203ENST00000526869 ZNF558Q96NG5 402 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 RUNDC3BQ96NL0 473 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 SLITRK1Q96PX8 696 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 KCNK16Q96T55 309 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 TBCBQ99426 244 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 LRRC1Q9BTT6 524 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 TTPALQ9BTX7 342 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 TRIM62Q9BVG3 475 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 OSBPL8Q9BZF1 889 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 ULBP1Q9BZM6 244 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 PRKAG2Q9UGJ0 569 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 USP18Q9UMW8 372 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 EFR3BQ9Y2G0 817 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 PCDHB5Q9Y5E4 795 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 LAG3P18627 525 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 NOS2P35228 1153 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 GJC1P36383 396 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 BRD3Q15059 726 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 SIX1Q15475 284 aaPredicted RBP21.46■■□□□ 1.03
SMCO4-203ENST00000526869 TAZQ16635 292 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 ODF2Q5BJF6 829 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 PM20D1Q6GTS8 502 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 BEND5Q7L4P6 421 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 TMEM173Q86WV6 379 aaPredicted RBP21.46■■□□□ 1.03
SMCO4-203ENST00000526869 CCDC50Q8IVM0 306 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 CMASQ8NFW8 434 aaPredicted RBP21.46■■□□□ 1.03
SMCO4-203ENST00000526869 C2orf15Q8WU43 125 aaKnown RBP21.46■■□□□ 1.03
SMCO4-203ENST00000526869 TEKT4Q8WW24 435 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 IGSF21Q96ID5 467 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 CFAP57Q96MR6 1250 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 RHOBTB2Q9BYZ6 727 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 EPC1Q9H2F5 836 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 RRN3Q9NYV6 651 aa21.46■■□□□ 1.03
SMCO4-203ENST00000526869 ALPK3Q96L96 1907 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 PRPSAP2O60256 369 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 ZBED1O96006 694 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 IL1R2P27930 398 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 CHRNA3P32297 505 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 KLF1Q13351 362 aaPredicted RBP21.45■■□□□ 1.02
SMCO4-203ENST00000526869 SMC1AQ14683 1233 aaKnown RBP21.45■■□□□ 1.02
SMCO4-203ENST00000526869 C15orf59Q2T9L4 293 aaPredicted RBP21.45■■□□□ 1.02
SMCO4-203ENST00000526869 USP41Q3LFD5 358 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 SLC25A52Q3SY17 297 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 BOLA3Q53S33 107 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 TXNRD3NBQ6F5E7 133 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 KCNT2Q6UVM3 1135 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 SPOCD1Q6ZMY3 1216 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 GPRIN1Q7Z2K8 1008 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 VSIG1Q86XK7 387 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 CEP57Q86XR8 500 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 KLHL7Q8IXQ5 586 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 PRELID2Q8N945 189 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 CCDC26Q8TAB7 109 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 FAM172AQ8WUF8 416 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 NT5C3BQ969T7 300 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 C8orf48Q96LL4 319 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 PNKPQ96T60 521 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 POPDC2Q9HBU9 364 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 HOMER3Q9NSC5 361 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 STIM2Q9P246 746 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 BACE2Q9Y5Z0 518 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 USP3Q9Y6I4 520 aa21.45■■□□□ 1.02
SMCO4-203ENST00000526869 CCDC151A5D8V7 595 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 NT5C1B-RDH14C9J2C7 533 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 TRIM66O15016 1216 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 ENDOD1O94919 500 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 OR4Q2P0C623 313 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 RARAP10276 462 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 ACRP10323 421 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 RALAP11233 206 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 TNFRSF8P28908 595 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 PBX3P40426 434 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 FNTAP49354 379 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 NDUFV1P49821 464 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 FPGSQ05932 587 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 GPR17Q13304 367 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 DHX34Q14147 1143 aaKnown RBP21.44■■□□□ 1.02
SMCO4-203ENST00000526869 TFDP3Q5H9I0 405 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 RTP2Q5QGT7 225 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 CYP4V2Q6ZWL3 525 aaPredicted RBP21.44■■□□□ 1.02
SMCO4-203ENST00000526869 BNIPLQ7Z465 357 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 MAATS1Q7Z4T9 603 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 DEFB106AQ8N104 65 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 SLC39A11Q8N1S5 342 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 SPPL2BQ8TCT7 592 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 PIK3R5Q8WYR1 880 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 FAM149B1Q96BN6 582 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 DDX47Q9H0S4 455 aaKnown RBP21.44■■□□□ 1.02
SMCO4-203ENST00000526869 NGRNQ9NPE2 291 aaKnown RBP21.44■■□□□ 1.02
SMCO4-203ENST00000526869 CHST7Q9NS84 486 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 MTRRQ9UBK8 725 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 STAP1Q9ULZ2 295 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms