RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 WT1P19544 449 aaPredicted RBP5.2□□□□□ -1.58
CD44-215ENST00000525241 DRD4P21917 467 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 GABRB3P28472 473 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 CTGFP29279 349 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 NTSR1P30989 418 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 ATICP31939 592 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 HTR3AP46098 478 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 CCT8P50990 548 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 DGKKQ5KSL6 1271 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 TSTD2Q5T7W7 516 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 XRRA1Q6P2D8 792 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 MZT2AQ6P582 158 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 ANKRD16Q6P6B7 361 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 CRTC1Q6UUV9 634 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 DPY19L3Q6ZPD9 716 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 KIAA0408Q6ZU52 694 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 TOGARAM2Q6ZUX3 1019 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 PARS2Q7L3T8 475 aaKnown RBP5.2□□□□□ -1.58
CD44-215ENST00000525241 MORC1Q86VD1 984 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 RASAL3Q86YV0 1011 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 TXLNBQ8N3L3 684 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 LRRC71Q8N4P6 559 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 FANCBQ8NB91 859 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 ZDHHC12Q96GR4 267 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 ZNF668Q96K58 619 aaPredicted RBP5.2□□□□□ -1.58
CD44-215ENST00000525241 UROC1Q96N76 676 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 MAGEB5Q9BZ81 275 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 INO80BQ9C086 356 aaPredicted RBP5.2□□□□□ -1.58
CD44-215ENST00000525241 KLK15Q9H2R5 256 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 DNAJB11Q9UBS4 358 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 ZNHIT2Q9UHR6 403 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 ADAM21Q9UKJ8 722 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 INSL6Q9Y581 213 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 PCDHGB2Q9Y5G2 931 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 ZNF213O14771 459 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 C1QL1O75973 258 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 NDST3O95803 873 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 PRKCBP05771 671 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 ENGP17813 658 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 ABCB4P21439 1286 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 BMP5P22003 454 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 EEF1GP26641 437 aaKnown RBP5.19□□□□□ -1.58
CD44-215ENST00000525241 HSPA7P48741 367 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 TPTEP56180 551 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 FHL3Q13643 280 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 MPEG1Q2M385 716 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 AARS2Q5JTZ9 985 aaKnown RBP5.19□□□□□ -1.58
CD44-215ENST00000525241 USP17L6PQ6QN14 398 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 USP49Q70CQ1 688 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 ZNF384Q8TF68 577 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 CTHRC1Q96CG8 243 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 BBC3Q96PG8 261 aaPredicted RBP5.19□□□□□ -1.58
CD44-215ENST00000525241 HIST1H2AAQ96QV6 131 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 PRR25Q96S07 402 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 DPCDQ9BVM2 203 aaPredicted RBP5.19□□□□□ -1.58
CD44-215ENST00000525241 FSD1LQ9BXM9 530 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 EIF2AQ9BY44 585 aaKnown RBP5.19□□□□□ -1.58
CD44-215ENST00000525241 SEMA4GQ9NTN9 838 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 ASB6Q9NWX5 421 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 RIMKLBQ9ULI2 386 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 FER1L4A9Z1Z3 1794 aa5.19□□□□□ -1.58
CD44-215ENST00000525241 FAM234BA2RU67 622 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 PLA2G6O60733 806 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 PMPCBO75439 489 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 GKP32189 559 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 SOX10P56693 466 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 EEFSECP57772 596 aaKnown RBP5.18□□□□□ -1.58
CD44-215ENST00000525241 RHBDL3P58872 404 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 E2F1Q01094 437 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 RAP1GAP2Q684P5 730 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 SKAP1Q86WV1 359 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 RAB11FIP4Q86YS3 637 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 SAMD3Q8N6K7 520 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 METTL25Q8N6Q8 603 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 GLIS1Q8NBF1 620 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 CCDC150Q8NCX0 1101 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 CYP2W1Q8TAV3 490 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 ZNF566Q969W8 418 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 WDYHV1Q96HA8 205 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 SNX27Q96L92 541 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 LENG8Q96PV6 779 aaPredicted RBP5.18□□□□□ -1.58
CD44-215ENST00000525241 THAP7Q9BT49 309 aaPredicted RBP5.18□□□□□ -1.58
CD44-215ENST00000525241 SLC25A32Q9H2D1 315 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 RIOX1Q9H6W3 641 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 CPNE5Q9HCH3 593 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 ZBTB26Q9HCK0 441 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 TRIM36Q9NQ86 728 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 CCNL1Q9UK58 526 aaPredicted RBP5.18□□□□□ -1.58
CD44-215ENST00000525241 ADAMTS5Q9UNA0 930 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 SLC27A6Q9Y2P4 619 aa5.18□□□□□ -1.58
CD44-215ENST00000525241 COL15A1P39059 1388 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 AP4M1O00189 453 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 PSMD9O00233 223 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 QSOX1O00391 747 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 EXOC5O00471 708 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 NUDT3O95989 172 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 DLDP09622 509 aaKnown RBP5.17□□□□□ -1.58
CD44-215ENST00000525241 ARP10275 920 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 HTR7P34969 479 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 MTHFSP49914 203 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms