RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 TAZQ16635 292 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 P3H1Q32P28 736 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 KRT71Q3SY84 523 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 KIAA0319Q5VV43 1072 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 RHBDF2Q6PJF5 856 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 SLC26A9Q7LBE3 791 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 UHMK1Q8TAS1 419 aaKnown RBP15.98■□□□□ 0.15
BEST1-204ENST00000524926 CCHCR1Q8TD31 782 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 PXYLP1Q8TE99 480 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 CYLDQ9NQC7 956 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 DNAJC17Q9NVM6 304 aaKnown RBP15.98■□□□□ 0.15
BEST1-204ENST00000524926 HMGB1P1B2RPK0 211 aaPredicted RBP15.98■□□□□ 0.15
BEST1-204ENST00000524926 BEST1O76090 585 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 SHBGP04278 402 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 ITGAVP06756 1048 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 RPL9P32969 192 aaKnown RBP15.98■□□□□ 0.15
BEST1-204ENST00000524926 LHX1P48742 406 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 DSC3Q14574 896 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 UPP1Q16831 310 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 TRIM71Q2Q1W2 868 aaKnown RBP15.98■□□□□ 0.15
BEST1-204ENST00000524926 PAN2Q504Q3 1202 aaKnown RBP15.98■□□□□ 0.15
BEST1-204ENST00000524926 BOLA3Q53S33 107 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 CYP4V2Q6ZWL3 525 aaPredicted RBP15.98■□□□□ 0.15
BEST1-204ENST00000524926 MAP7D3Q8IWC1 876 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 SLC35B2Q8TB61 432 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 NKD2Q969F2 451 aaPredicted RBP15.98■□□□□ 0.15
BEST1-204ENST00000524926 PGBD4Q96DM1 585 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 CFHR5Q9BXR6 569 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 TRPV6Q9H1D0 765 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 THSD7BQ9C0I4 1608 aa15.98■□□□□ 0.15
BEST1-204ENST00000524926 MOXD2PA6NHM9 499 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 B3GAT3O94766 335 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 NPR3P17342 541 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 TFE3P19532 575 aaPredicted RBP15.97■□□□□ 0.15
BEST1-204ENST00000524926 RPL34P49207 117 aaKnown RBP15.97■□□□□ 0.15
BEST1-204ENST00000524926 FAM26DQ5JW98 314 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 TMEM86AQ8N2M4 240 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 C10orf88Q9H8K7 445 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 GPATCH2LQ9NWQ4 482 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 ERICH4A6NGS2 130 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 RIPK2O43353 540 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 INHAP05111 366 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 NUDT17P0C025 328 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 CKBP12277 381 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 ADIGQ0VDE8 80 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 GPS1Q13098 491 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 ZC3H12AQ5D1E8 599 aaKnown RBP15.97■□□□□ 0.15
BEST1-204ENST00000524926 UBAP2Q5T6F2 1119 aaKnown RBP15.97■□□□□ 0.15
BEST1-204ENST00000524926 PAQR9Q6ZVX9 377 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.97■□□□□ 0.15
BEST1-204ENST00000524926 NDRG1Q92597 394 aaKnown RBP15.97■□□□□ 0.15
BEST1-204ENST00000524926 FAM149B1Q96BN6 582 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 PWWP2AQ96N64 755 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 TSPYL1Q9H0U9 437 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 AAASQ9NRG9 546 aa15.97■□□□□ 0.15
BEST1-204ENST00000524926 I3L4J1 428 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 HDAC4P56524 1084 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 MAP3K7CLP57077 242 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 DPYSL3Q14195 570 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 TIGD5Q53EQ6 642 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 EFHC1Q5JVL4 640 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 NCAPGQ9BPX3 1015 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 SYT15Q9BQS2 421 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 FRMD8P1Q9BZ68 369 aaPredicted RBP15.96■□□□□ 0.15
BEST1-204ENST00000524926 CDC42EP4Q9H3Q1 356 aaKnown RBP15.96■□□□□ 0.15
BEST1-204ENST00000524926 LRRC4Q9HBW1 653 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 LRRC4CQ9HCJ2 640 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 HMX1Q9NP08 348 aaPredicted RBP15.96■□□□□ 0.15
BEST1-204ENST00000524926 CRTAC1Q9NQ79 661 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.96■□□□□ 0.15
BEST1-204ENST00000524926 TLDC2A0PJX2 215 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 MYBPHLA2RUH7 354 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 APOC4-APOC2K7ER74 178 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 ENDOD1O94919 500 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 APOC2P02655 101 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 FAM200BP0CF97 657 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 SKIP12755 728 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 PECAM1P16284 738 aaPredicted RBP15.96■□□□□ 0.15
BEST1-204ENST00000524926 ATP1A2P50993 1020 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 ATXN1P54253 815 aaKnown RBP15.96■□□□□ 0.15
BEST1-204ENST00000524926 PDK2Q15119 407 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 CLEC20AQ6ZU45 233 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 TRMT10CQ7L0Y3 403 aaKnown RBP15.96■□□□□ 0.15
BEST1-204ENST00000524926 HASPINQ8TF76 798 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 RSAD2Q8WXG1 361 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 SNRNP25Q9BV90 132 aaKnown RBP15.96■□□□□ 0.15
BEST1-204ENST00000524926 UBN1Q9NPG3 1134 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 STARD7Q9NQZ5 370 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 KRT82Q9NSB4 513 aa15.96■□□□□ 0.15
BEST1-204ENST00000524926 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.96■□□□□ 0.15
BEST1-204ENST00000524926 NR1D1P20393 614 aa15.95■□□□□ 0.14
BEST1-204ENST00000524926 HPDP32754 393 aaPredicted RBP15.95■□□□□ 0.14
BEST1-204ENST00000524926 SCNN1AP37088 669 aa15.95■□□□□ 0.14
BEST1-204ENST00000524926 PTPN9P43378 593 aa15.95■□□□□ 0.14
BEST1-204ENST00000524926 EIF3EP60228 445 aaKnown RBP15.95■□□□□ 0.14
BEST1-204ENST00000524926 TFDP2Q14188 446 aa15.95■□□□□ 0.14
BEST1-204ENST00000524926 PPP6R3Q5H9R7 873 aaPredicted RBP15.95■□□□□ 0.14
BEST1-204ENST00000524926 LHX8Q68G74 356 aa15.95■□□□□ 0.14
BEST1-204ENST00000524926 HIBCHQ6NVY1 386 aaPredicted RBP15.95■□□□□ 0.14
BEST1-204ENST00000524926 HOOK3Q86VS8 718 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms