RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 UNC93AQ86WB7 457 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 SLC2A14Q8TDB8 520 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 LENG1Q96BZ8 264 aaPredicted RBP17.7■□□□□ 0.42
BEST1-203ENST00000524877 SRPK1Q96SB4 655 aaKnown RBP17.7■□□□□ 0.42
BEST1-203ENST00000524877 Q9Y3F1 56 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 ARVCFO00192 962 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 PSTPIP1O43586 416 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 TSPAN3O60637 253 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 DARSP14868 501 aaKnown RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 ITGB3BPQ13352 177 aaPredicted RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 HSDL1Q3SXM5 330 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 ZRANB3Q5FWF4 1079 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 PTRHD1Q6GMV3 140 aaKnown RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 ERAP2Q6P179 960 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 OR6C75A6NL08 312 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 C2orf81A6NN90 581 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 SPATA18Q8TC71 538 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 SPATA16Q9BXB7 569 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 CDT1Q9H211 546 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 USP20Q9Y2K6 914 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 ZW10O43264 779 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 PTPN1P18031 435 aaKnown RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 HADHAP40939 763 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 TMED10P49755 219 aaKnown RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 ATP1A2P50993 1020 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 MDM2Q00987 491 aaPredicted RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 WSCD1Q658N2 575 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 HAS1Q92839 578 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 GFM2Q969S9 779 aaKnown RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 FGD4Q96M96 766 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 ARHGEF38Q9NXL2 777 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 NSMCE4AQ9NXX6 385 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 LTBP4Q8N2S1 1624 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 GTPBP10A4D1E9 387 aaKnown RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 CBX4O00257 560 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 FOXP2O15409 715 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 PCDH8O95206 1070 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 POLR2EP19388 210 aaKnown RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 ESRRGP62508 458 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 TBC1D1Q86TI0 1168 aaPredicted RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 ENGASEQ8NFI3 743 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 ZNF296Q8WUU4 475 aaPredicted RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 C18orf25Q96B23 403 aaPredicted RBP17.69■□□□□ 0.42
BEST1-203ENST00000524877 NFKBIZQ9BYH8 718 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 PTCH2Q9Y6C5 1203 aa17.69■□□□□ 0.42
BEST1-203ENST00000524877 NHSL1Q5SYE7 1610 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 GSTA4O15217 222 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 ZNF284Q2VY69 593 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 TTPALQ9BTX7 342 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 PADI3Q9ULW8 664 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 DERAQ9Y315 318 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 ARIH1Q9Y4X5 557 aaPredicted RBP17.68■□□□□ 0.42
BEST1-203ENST00000524877 ZNF263O14978 683 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 CCDC130P13994 396 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 ARID5BQ14865 1188 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 NPAS4Q8IUM7 802 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 ETNPPLQ8TBG4 499 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 HES2Q9Y543 173 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 COMTP21964 271 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 SGCGQ13326 291 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 ADCK2Q7Z695 626 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 ABCC13Q9NSE7 274 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 EVA1BQ9NVM1 165 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 IGKV6D-41A0A0C4DH26 115 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 STX7O15400 261 aaKnown RBP17.68■□□□□ 0.42
BEST1-203ENST00000524877 GTF2BQ00403 316 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 UGCGQ16739 394 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 UGP2Q16851 508 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 EDEM1Q92611 657 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 LRGUKQ96M69 825 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 ALS2Q96Q42 1657 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 CNPY3Q9BT09 278 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 NDUFS2O75306 463 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 ATP5BP06576 529 aaKnown RBP17.68■□□□□ 0.42
BEST1-203ENST00000524877 HIF1AQ16665 826 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 CLEC4DQ8WXI8 215 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 FRMD8P1Q9BZ68 369 aaPredicted RBP17.68■□□□□ 0.42
BEST1-203ENST00000524877 RAB6BQ9NRW1 208 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 C2CD2Q9Y426 696 aa17.68■□□□□ 0.42
BEST1-203ENST00000524877 PHF20L1A8MW92 1017 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 ATP5C1P36542 298 aaKnown RBP17.67■□□□□ 0.42
BEST1-203ENST00000524877 SMARCB1Q12824 385 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 HECTD3Q5T447 861 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 CENPPQ6IPU0 288 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 KIAA2013Q8IYS2 634 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 HS6ST3Q8IZP7 471 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 PTPRN2Q92932 1015 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 ZFATQ9P243 1243 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 CDC25CP30307 473 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 SF3A3Q12874 501 aaKnown RBP eCLIP17.67■□□□□ 0.42
BEST1-203ENST00000524877 VPS9D1Q9Y2B5 631 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 CST8O60676 142 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 APRTP07741 180 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 CCDC159P0C7I6 412 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 TTI2Q6NXR4 508 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 TMA16Q96EY4 203 aaKnown RBP17.67■□□□□ 0.42
BEST1-203ENST00000524877 OSBPL8Q9BZF1 889 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 NFU1Q9UMS0 254 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 AP4E1Q9UPM8 1137 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 PHF2O75151 1096 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms