RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 TRIM5Q9C035 493 aa18.54■□□□□ 0.56
PACSIN3-202ENST00000524509 XPO4Q9C0E2 1151 aaKnown RBP18.54■□□□□ 0.56
PACSIN3-202ENST00000524509 MIS12Q9H081 205 aa18.54■□□□□ 0.56
PACSIN3-202ENST00000524509 LHX5Q9H2C1 402 aa18.54■□□□□ 0.56
PACSIN3-202ENST00000524509 ATXN3LQ9H3M9 355 aa18.54■□□□□ 0.56
PACSIN3-202ENST00000524509 LRRC4Q9HBW1 653 aa18.54■□□□□ 0.56
PACSIN3-202ENST00000524509 CYLDQ9NQC7 956 aa18.54■□□□□ 0.56
PACSIN3-202ENST00000524509 IL37Q9NZH6 218 aa18.54■□□□□ 0.56
PACSIN3-202ENST00000524509 CDH7Q9ULB5 785 aa18.54■□□□□ 0.56
PACSIN3-202ENST00000524509 PCDHGC3Q9UN70 934 aa18.54■□□□□ 0.56
PACSIN3-202ENST00000524509 MTCL1Q9Y4B5 1905 aaKnown RBP18.54■□□□□ 0.56
PACSIN3-202ENST00000524509 NCANO14594 1321 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 M0QYV0 167 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 HMGA1P17096 107 aaKnown RBP18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 BRD2P25440 801 aaKnown RBP18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 GABRR2P28476 465 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 GBP2P32456 591 aaPredicted RBP18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 KLK7P49862 253 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 SLC5A3P53794 718 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 SPECC1LQ69YQ0 1117 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 MTSS1LQ765P7 747 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 TMC8Q8IU68 726 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 MSANTD4Q8NCY6 345 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 KCTD13Q8WZ19 329 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 E2F7Q96AV8 911 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 HCFC1R1Q9NWW0 138 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 DUSP12Q9UNI6 340 aa18.53■□□□□ 0.56
PACSIN3-202ENST00000524509 TNFRSF10BO14763 440 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 SART1O43290 800 aaKnown RBP18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 CYP11B1P15538 503 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 CLCN1P35523 988 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 PBX1P40424 430 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 GPR15P49685 360 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 TSR1Q2NL82 804 aaKnown RBP18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 PRSS36Q5K4E3 855 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 PPP1R2P3Q6NXS1 205 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 TRIM72Q6ZMU5 477 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 GET4Q7L5D6 327 aaPredicted RBP18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 TADA2BQ86TJ2 420 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 GPR152Q8TDT2 470 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 TFAP2BQ92481 460 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 FBXO32Q969P5 355 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 CDK5RAP1Q96SZ6 601 aaKnown RBP18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 TRIM62Q9BVG3 475 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 LRRC3Q9BY71 257 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 RBSNQ9H1K0 784 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 SLITRK6Q9H5Y7 841 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 TLR8Q9NR97 1041 aaKnown RBP18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 EPS15L1Q9UBC2 864 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 SCML2Q9UQR0 700 aa18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 LUC7L2Q9Y383 392 aaKnown RBP18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 BZW2Q9Y6E2 419 aaKnown RBP18.52■□□□□ 0.56
PACSIN3-202ENST00000524509 FAM92AA1XBS5 289 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 GFPT2O94808 682 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 FBXO21O94952 628 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 LSM8O95777 96 aaKnown RBP18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 LMNAP02545 664 aaKnown RBP18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 F11P03951 625 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 WEE1P30291 646 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 CDR1P51861 262 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 KIF11P52732 1056 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 PDE4CQ08493 712 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 PKDCCQ504Y2 493 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 SDHAF4Q5VUM1 108 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 PIGZQ86VD9 579 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 SLC47A2Q86VL8 602 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 MON1AQ86VX9 555 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 TTC30AQ86WT1 665 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 HS6ST3Q8IZP7 471 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 SIX6OS1Q8N1H7 587 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 TMEM35BQ8NCS4 154 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 ZMIZ2Q8NF64 920 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 SLC35F5Q8WV83 523 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 SYN2Q92777 582 aaPredicted RBP18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 FGF13Q92913 245 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 TASP1Q9H6P5 420 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 KCNK12Q9HB15 430 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 FBXL21Q9UKT6 434 aa18.51■□□□□ 0.55
PACSIN3-202ENST00000524509 DNAH14Q0VDD8 3507 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 A0A1W2PRU2 124 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 EPHB6O15197 1021 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 LAMP2P13473 410 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 CACNA2D1P54289 1103 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 NTHL1P78549 312 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 ZBED6P86452 979 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 TAF10Q12962 218 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 RAB41Q5JT25 222 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 SFMBT2Q5VUG0 894 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 CCDC186Q7Z3E2 898 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 SIX5Q8N196 739 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 SCML4Q8N228 414 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 UBA3Q8TBC4 463 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 GOLGA1Q92805 767 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 RMDN1Q96DB5 314 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 CNGB3Q9NQW8 809 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 AIPL1Q9NZN9 384 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 IGSF9Q9P2J2 1179 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 AJAP1Q9UKB5 411 aaPredicted RBP18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 CAPN11Q9UMQ6 739 aa18.5■□□□□ 0.55
PACSIN3-202ENST00000524509 USP3Q9Y6I4 520 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms