RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 RAP1GAP2Q684P5 730 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 MRGPREQ86SM8 312 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 CAND1Q86VP6 1230 aaKnown RBP4.57□□□□□ -1.68
SKP1-212ENST00000523966 CCDC117Q8IWD4 279 aaPredicted RBP4.57□□□□□ -1.68
SKP1-212ENST00000523966 SMAP1Q8IYB5 467 aaPredicted RBP4.57□□□□□ -1.68
SKP1-212ENST00000523966 FAM71BQ8TC56 605 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 C18orf8Q96DM3 657 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 ZDHHC12Q96GR4 267 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 EIF3CQ99613 913 aaKnown RBP4.57□□□□□ -1.68
SKP1-212ENST00000523966 GDF15Q99988 308 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 VN1R3Q9BXE9 311 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 MMRN2Q9H8L6 949 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 STEAP1Q9UHE8 339 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 DRG1Q9Y295 367 aaKnown RBP4.57□□□□□ -1.68
SKP1-212ENST00000523966 SNX14Q9Y5W7 946 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 A0A087WZ62 844 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 CCDC151A5D8V7 595 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 NPC1O15118 1278 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 MPPED1O15442 326 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 PROM1O43490 865 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 CREB3O43889 395 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 DLDP09622 509 aaKnown RBP4.56□□□□□ -1.68
SKP1-212ENST00000523966 NR2F6P10588 404 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 PECAM1P16284 738 aaPredicted RBP4.56□□□□□ -1.68
SKP1-212ENST00000523966 ZFXP17010 805 aaPredicted RBP4.56□□□□□ -1.68
SKP1-212ENST00000523966 RBL1P28749 1068 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 PDIA3P30101 505 aaKnown RBP4.56□□□□□ -1.68
SKP1-212ENST00000523966 SLC5A2P31639 672 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 MCM7P33993 719 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 ZEB1P37275 1124 aaPredicted RBP4.56□□□□□ -1.68
SKP1-212ENST00000523966 ATXN1P54253 815 aaKnown RBP4.56□□□□□ -1.68
SKP1-212ENST00000523966 TPTEP56180 551 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 SUMO2P61956 95 aaKnown RBP4.56□□□□□ -1.68
SKP1-212ENST00000523966 MRPS35P82673 323 aaKnown RBP4.56□□□□□ -1.68
SKP1-212ENST00000523966 BIRC3Q13489 604 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 PRKG1Q13976 671 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 LY6KQ17RY6 165 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 P3H1Q32P28 736 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 TBC1D25Q3MII6 688 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 ARHGAP15Q53QZ3 475 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 TMTC4Q5T4D3 741 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 ATPAF1Q5TC12 328 aaPredicted RBP4.56□□□□□ -1.68
SKP1-212ENST00000523966 DENND2CQ68D51 928 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 SLC9A4Q6AI14 798 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 TLDC1Q6P9B6 456 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 KLHL17Q6TDP4 642 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 Q6ZNX1 250 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 RFX8Q6ZV50 586 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 RHOUQ7L0Q8 258 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 CPXCR1Q8N123 301 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 SLC44A3Q8N4M1 653 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 LRRC71Q8N4P6 559 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 MYRIPQ8NFW9 859 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 MBD3L2Q8NHZ7 208 aaPredicted RBP4.56□□□□□ -1.68
SKP1-212ENST00000523966 TRAPPC12Q8WVT3 735 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 PPM1EQ8WY54 764 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 RUBCNQ92622 972 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 R3HDM4Q96D70 268 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 VPS50Q96JG6 964 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 MLST8Q9BVC4 326 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 AGO4Q9HCK5 861 aaKnown RBP4.56□□□□□ -1.68
SKP1-212ENST00000523966 TMEM8AQ9HCN3 771 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 HS3ST4Q9Y661 456 aa4.56□□□□□ -1.68
SKP1-212ENST00000523966 ADGRA2Q96PE1 1338 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 PNMA6EA0A0J9YXQ4 647 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 AQP12BA6NM10 295 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 SYT5O00445 386 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 EXOC5O00471 708 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 USP1O94782 785 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 ZNF202O95125 648 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 TTLL1O95922 423 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 FESP07332 822 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 RHOP08100 348 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 ITGA2BP08514 1039 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 NPPBP16860 134 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 NDUFB7P17568 137 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 TYRP1P17643 537 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 NTSR1P30989 418 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 CCT5P48643 541 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 TIRAPP58753 221 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 MPP3Q13368 585 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 ATP1A4Q13733 1029 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 RAPGEF1Q13905 1077 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 ST3GAL2Q16842 350 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 NRSN1Q8IZ57 195 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 C11orf44Q8N8P7 122 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 WDR60Q8WVS4 1066 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 TFAP2BQ92481 460 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 PBKQ96KB5 322 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 AS3MTQ9HBK9 375 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 TRIM36Q9NQ86 728 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 ARHGEF3Q9NR81 526 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 IGSF9Q9P2J2 1179 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.55□□□□□ -1.68
SKP1-212ENST00000523966 HERC5Q9UII4 1024 aaKnown RBP4.55□□□□□ -1.68
SKP1-212ENST00000523966 SH2B3Q9UQQ2 575 aa4.55□□□□□ -1.68
SKP1-212ENST00000523966 TMEM191CA6NGB0 347 aa4.54□□□□□ -1.68
SKP1-212ENST00000523966 NPIPB8E9PQR5 432 aa4.54□□□□□ -1.68
SKP1-212ENST00000523966 QSOX1O00391 747 aa4.54□□□□□ -1.68
SKP1-212ENST00000523966 TRIM38O00635 465 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms