RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PKDCCQ504Y2 493 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 KLHDC7AQ5VTJ3 777 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 GJB7Q6PEY0 223 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 CCDC186Q7Z3E2 898 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 DDX42Q86XP3 938 aaKnown RBP eCLIP13.24□□□□□ -0.295e-7■■■■□ 19.9
VEGFA-225ENST00000523950 ARHGAP18Q8N392 663 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 KCTD13Q8WZ19 329 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 TFAP2BQ92481 460 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 USP13Q92995 863 aaPredicted RBP13.24□□□□□ -0.29
VEGFA-225ENST00000523950 MSANTD3Q96H12 275 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 LSM14BQ9BX40 385 aaKnown RBP13.24□□□□□ -0.29
VEGFA-225ENST00000523950 SMOC2Q9H3U7 446 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 BRD9Q9H8M2 597 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 C11orf16Q9NQ32 467 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 THG1LQ9NWX6 298 aaKnown RBP13.24□□□□□ -0.29
VEGFA-225ENST00000523950 TECTAO75443 2155 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 COL4A2P08572 1712 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 C2orf78A6NCI8 922 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 CFHP08603 1231 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 UCHL3P15374 230 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 BRD2P25440 801 aaKnown RBP13.23□□□□□ -0.29
VEGFA-225ENST00000523950 GNA15P30679 374 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 MLLT6P55198 1093 aaPredicted RBP13.23□□□□□ -0.29
VEGFA-225ENST00000523950 BPIFB4P59827 614 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 PRKCQQ04759 706 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 PTK2Q05397 1052 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 USP4Q13107 963 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 FILIP1LQ4L180 1135 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 HECTD3Q5T447 861 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 C1orf228Q6PIY5 440 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 APTXQ7Z2E3 356 aaKnown RBP13.23□□□□□ -0.29
VEGFA-225ENST00000523950 GPRIN1Q7Z2K8 1008 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 TADA2BQ86TJ2 420 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 SCML4Q8N228 414 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 ZNF276Q8N554 614 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 ARL14EPQ8N8R7 260 aaPredicted RBP13.23□□□□□ -0.29
VEGFA-225ENST00000523950 RSPRY1Q96DX4 576 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 SHDQ96IW2 340 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 HSFY1Q96LI6 401 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 ERGIC2Q96RQ1 377 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 CDK5RAP1Q96SZ6 601 aaKnown RBP13.23□□□□□ -0.29
VEGFA-225ENST00000523950 LRRC4Q9HBW1 653 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 ARHGEF3Q9NR81 526 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 CLIC5Q9NZA1 410 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 GMIPQ9P107 970 aa13.23□□□□□ -0.29
VEGFA-225ENST00000523950 BDP1A6H8Y1 2624 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 TICRRQ7Z2Z1 1910 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 M0QYV0 167 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 ABL1P00519 1130 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 GLULP15104 373 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 GDI1P31150 447 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 USP8P40818 1118 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 APBA1Q02410 837 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 UBXN1Q04323 297 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 GRM2Q14416 872 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 DRAP1Q14919 205 aaPredicted RBP13.22□□□□□ -0.29
VEGFA-225ENST00000523950 ZNF77Q15935 545 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 PM20D1Q6GTS8 502 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 KLHDC10Q6PID8 442 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 FAM71AQ8IYT1 594 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 ST13P5Q8NFI4 369 aaPredicted RBP13.22□□□□□ -0.29
VEGFA-225ENST00000523950 SLC35F5Q8WV83 523 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 ZNF606Q8WXB4 792 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 PBXIP1Q96AQ6 731 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 NAA15Q9BXJ9 866 aaKnown RBP13.22□□□□□ -0.29
VEGFA-225ENST00000523950 STK33Q9BYT3 514 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 CYLDQ9NQC7 956 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 CNGB3Q9NQW8 809 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 CHORDC1Q9UHD1 332 aaPredicted RBP13.22□□□□□ -0.29
VEGFA-225ENST00000523950 SIK3Q9Y2K2 1263 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 FHOD1Q9Y613 1164 aa13.22□□□□□ -0.29
VEGFA-225ENST00000523950 GOLGA6L19H0YKK7 550 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 ARNTLO00327 626 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 FOXN3O00409 490 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-225ENST00000523950 THAP12O43422 761 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 TLR5O60602 858 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 ZBED1O96006 694 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 RALAP11233 206 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 ATP1A3P13637 1013 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 ACADSBP45954 432 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 TKTL1P51854 596 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 STARD6P59095 220 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 RAPGEF1Q13905 1077 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 MTF1Q14872 753 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 PDGFRLQ15198 375 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 SYCP1Q15431 976 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 MLF2Q15773 248 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-225ENST00000523950 CC2D1AQ6P1N0 951 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-225ENST00000523950 SUGP1Q8IWZ8 645 aaKnown RBP13.21□□□□□ -0.29
VEGFA-225ENST00000523950 SIX5Q8N196 739 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 FBXL6Q8N531 539 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 NEK11Q8NG66 645 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 UBA3Q8TBC4 463 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 CSGALNACT1Q8TDX6 532 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 STK32AQ8WU08 396 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 SECISBP2LQ93073 1101 aaKnown RBP13.21□□□□□ -0.29
VEGFA-225ENST00000523950 SLC22A12Q96S37 553 aa13.21□□□□□ -0.29
VEGFA-225ENST00000523950 CYP2S1Q96SQ9 504 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms