RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 ACCSQ96QU6 501 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 CCDC86Q9H6F5 360 aaKnown RBP8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 MRPL44Q9H9J2 332 aaKnown RBP8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 CAPN10Q9HC96 672 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 TBC1D14Q9P2M4 693 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 METRNQ9UJH8 293 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 GPSM3Q9Y4H4 160 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 CACNA1EQ15878 2313 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 SETXQ7Z333 2677 aaKnown RBP8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 A0A1W2PQD8 194 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 GOLGA8IPA6NC78 632 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 GOLGA8JA6NMD2 632 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 EIF4E1BA6NMX2 242 aaKnown RBP8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 TRIM66O15016 1216 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 CAPNS1P04632 268 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 GABRG2P18507 467 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 GARTP22102 1010 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 LONP1P36776 959 aaKnown RBP8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 WASP42768 502 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 KCNA1Q09470 495 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 IFRD2Q12894 506 aaPredicted RBP8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 TAF10Q12962 218 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 SLC14A1Q13336 389 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 COL28A1Q2UY09 1125 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 SOWAHCQ53LP3 525 aaPredicted RBP8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 LY6G5CQ5SRR4 150 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 L1TD1Q5T7N2 865 aaKnown RBP8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 SDE2Q6IQ49 451 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 HS2ST1Q7LGA3 356 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 SYCP3Q8IZU3 236 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 PNPLA1Q8N8W4 532 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 TRIML1Q8N9V2 468 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 SPRYD3Q8NCJ5 442 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 ZSWIM2Q8NEG5 633 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 CXorf38Q8TB03 319 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 ADAMTS14Q8WXS8 1223 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 HPDLQ96IR7 371 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 FAM84AQ96KN4 292 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 SLITRK1Q96PX8 696 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 MMS19Q96T76 1030 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 TTLL2Q9BWV7 592 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 MTMR12Q9C0I1 747 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 PCIF1Q9H4Z3 704 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 PDE11AQ9HCR9 933 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 CRTAC1Q9NQ79 661 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 DNAAF2Q9NVR5 837 aaKnown RBP8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 TBC1D7Q9P0N9 293 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 CALCOCO1Q9P1Z2 691 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 DEC1Q9P2X7 70 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 SIX4Q9UIU6 781 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 CYP8B1Q9UNU6 501 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 OBSL1O75147 1896 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 SMG1Q96Q15 3661 aaKnown RBP8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 TCHHQ07283 1943 aa8.46□□□□□ -1.06
NSMCE2-213ENST00000523824 PCNX2A6NKB5 2137 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 KIAA1549LQ6ZVL6 1849 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 MYO16Q9Y6X6 1858 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 GON4LQ3T8J9 2241 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 IGHV1OR15-9A0A0B4J2B8 117 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 E2F8A0AVK6 867 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 F8VP50 259 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 NDUFS2O75306 463 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 ZNF217O75362 1048 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 PPP1R37O75864 691 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 GCNT3O95395 438 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 OLFM2O95897 454 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 OAS1P00973 400 aaKnown RBP8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 TNNC2P02585 160 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 FTH1P19P0C7X4 201 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 HOXB2P14652 356 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 GNSP15586 552 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 WARSP23381 471 aaKnown RBP8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 YWHAQP27348 245 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 NTSR1P30989 418 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 GNL1P36915 607 aaPredicted RBP8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 NOP14P78316 857 aaKnown RBP8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 ANO4Q32M45 955 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 PLEKHG6Q3KR16 790 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 MDH1BQ5I0G3 518 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 C10orf76Q5T2E6 689 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 SYCP2LQ5T4T6 812 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 CCNI2Q6ZMN8 369 aaPredicted RBP8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 SLC41A1Q8IVJ1 513 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 MYCBPAPQ8TBZ2 947 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 HNRNPLLQ8WVV9 542 aaKnown RBP8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 KBTBD7Q8WVZ9 684 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 OTUB2Q96DC9 234 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 PCED1BQ96HM7 432 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 C8orf48Q96LL4 319 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 HSPA12BQ96MM6 686 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 SNX25Q9H3E2 840 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 FAM124BQ9H5Z6 455 aaPredicted RBP8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 INTS13Q9NVM9 706 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 SEL1LQ9UBV2 794 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 SUSD2Q9UGT4 822 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 APOBEC2Q9Y235 224 aaKnown RBP8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 SH3BP1Q9Y3L3 701 aa8.45□□□□□ -1.06
NSMCE2-213ENST00000523824 FREM2Q5SZK8 3169 aa8.44□□□□□ -1.06
NSMCE2-213ENST00000523824 TULP3O75386 442 aa8.44□□□□□ -1.06
NSMCE2-213ENST00000523824 PRPF6O94906 941 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms