RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 VCPP55072 806 aaKnown RBP13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 YWHAZP63104 245 aaKnown RBP13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 NFE2Q16621 373 aaPredicted RBP13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 DEFB106AQ8N104 65 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 KREMEN1Q96MU8 473 aa13.58□□□□□ -0.24
PCDHGB1-201ENST00000523390 JCHAINP01591 159 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 HMGCRP04035 888 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 CYP2F1P24903 491 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 RPL21P46778 160 aaKnown RBP13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 TWF1Q12792 350 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 ACAD11Q709F0 780 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 LRRC6Q86X45 466 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 FRMD3A2A2Y4 597 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 NOL3O60936 208 aaKnown RBP13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 ZNF189O75820 626 aaPredicted RBP13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 FBXO21O94952 628 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 RFC1P35251 1148 aaPredicted RBP13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 FKBP1BP68106 108 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 DUSP28Q4G0W2 176 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 ATP13A4Q4VNC1 1196 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 C12orf56Q8IXR9 622 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 MFSD14AQ96MC6 490 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 GMLQ99445 158 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 HACD3Q9P035 362 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 FAM110CQ1W6H9 321 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 ZBTB41Q5SVQ8 909 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 WSCD1Q658N2 575 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 ZNF280DQ6N043 979 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 LVRNQ6Q4G3 990 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 PPP1R36Q96LQ0 422 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 EGFL8Q99944 293 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 C10orf88Q9H8K7 445 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 HMX1Q9NP08 348 aaPredicted RBP13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 NPHS2Q9NP85 383 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 ARHGEF38Q9NXL2 777 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 WRAP73Q9P2S5 460 aaPredicted RBP13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 DNPEPQ9ULA0 475 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 NOL4O94818 638 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 DNAJB2P25686 324 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 SERPINB9P50453 376 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 C15orf59Q2T9L4 293 aaPredicted RBP13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 NAPEPLDQ6IQ20 393 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 LLGL2Q6P1M3 1020 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 MBOAT7Q96N66 472 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 MTIF3Q9H2K0 278 aaKnown RBP13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 AFF4Q9UHB7 1163 aaKnown RBP13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 DSEQ9UL01 958 aa13.57□□□□□ -0.24
PCDHGB1-201ENST00000523390 ZNF263O14978 683 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 PSMD3O43242 534 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 ALDH2P05091 517 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 RAB27AP51159 221 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 GEMIN4P57678 1058 aaKnown RBP13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 ATP6V0D2Q8N8Y2 350 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 TSSK1BQ9BXA7 367 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 TRPV6Q9H1D0 765 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 XPNPEP1Q9NQW7 623 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 SH3BP1Q9Y3L3 701 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 SLC12A8A0AV02 714 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 ASS1P00966 412 aaKnown RBP13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 AMPD1P23109 780 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 SPRP35270 261 aaPredicted RBP13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 UGP2Q16851 508 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 GRAMD1AQ96CP6 724 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 CELF6Q96J87 481 aaKnown RBP13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 SERPINB12Q96P63 405 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 NUDT5Q9UKK9 219 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 BAG5Q9UL15 447 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 SLC2A3P11169 496 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 MAMLD1Q13495 774 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 FAM171A1Q5VUB5 890 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 LPPQ93052 612 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 C12orf42Q96LP6 360 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 APBA2Q99767 749 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 FAM129AQ9BZQ8 928 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 DHX33Q9H6R0 707 aaKnown RBP13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 UBP1Q9NZI7 540 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 ARHGAP28Q9P2N2 729 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 SAE1Q9UBE0 346 aaPredicted RBP13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 TBKBP1A7MCY6 615 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 AP3B1O00203 1094 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 KRT4P19013 534 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 FLT3LGP49771 235 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 RPL7AP62424 266 aaKnown RBP13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 SLC6A3Q01959 620 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 DNAJC3Q13217 504 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 MORF4L2Q15014 288 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 TMTC4Q5T4D3 741 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 HGSNATQ68CP4 663 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 ARHGAP18Q8N392 663 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 ULK4Q96C45 1275 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 DDX23Q9BUQ8 820 aaKnown RBP13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 CYP4F11Q9HBI6 524 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
PCDHGB1-201ENST00000523390 AHDC1Q5TGY3 1603 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 TTC4O95801 387 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 GFAPP14136 432 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 BDNFP23560 247 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 STX3Q13277 289 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms