RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 TRIM5Q9C035 493 aa4.77□□□□□ -1.65
CLK4-213ENST00000523013 A1CFQ9NQ94 594 aaKnown RBP4.77□□□□□ -1.65
CLK4-213ENST00000523013 ZSCAN32Q9NX65 697 aa4.77□□□□□ -1.65
CLK4-213ENST00000523013 ZIM2Q9NZV7 527 aa4.77□□□□□ -1.65
CLK4-213ENST00000523013 hCG_2014768A0A024R1R8 64 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 TMEM232C9JQI7 657 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 M0R3H8 397 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 PSMD9O00233 223 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 SRGAP2O75044 1071 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 MT-CO3P00414 261 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 SLC7A1P30825 629 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 UQCRC1P31930 480 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 DIO1P49895 249 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 FOXG1P55316 489 aaPredicted RBP4.76□□□□□ -1.65
CLK4-213ENST00000523013 TIAL1Q01085 375 aaKnown RBP eCLIP4.76□□□□□ -1.65
CLK4-213ENST00000523013 AWAT1Q58HT5 328 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 KIAA0319LQ8IZA0 1049 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 NANOGP1Q8N7R0 232 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 NRACQ8N912 160 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 SPSB4Q96A44 273 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 CCDC17Q96LX7 622 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 WACQ9BTA9 647 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 TMEM60Q9H2L4 133 aa4.76□□□□□ -1.65
CLK4-213ENST00000523013 TRIM43BA6NCK2 446 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 MBD3L4A6NDZ8 208 aaPredicted RBP4.75□□□□□ -1.65
CLK4-213ENST00000523013 MBD3L3A6NE82 208 aaPredicted RBP4.75□□□□□ -1.65
CLK4-213ENST00000523013 ADAM10O14672 748 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 IKBKBO14920 756 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 DSCR3O14972 297 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 CD3EAPO15446 510 aaKnown RBP4.75□□□□□ -1.65
CLK4-213ENST00000523013 SPRY2O43597 315 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 CTNND1O60716 968 aaKnown RBP4.75□□□□□ -1.65
CLK4-213ENST00000523013 GCATO75600 419 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 HOXD9P28356 352 aaPredicted RBP4.75□□□□□ -1.65
CLK4-213ENST00000523013 EPHB1P54762 984 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 TIRAPP58753 221 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 FHL1Q13642 323 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 RAB11FIP4Q86YS3 637 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 C16orf52Q8NHV5 167 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 TRIM43Q96BQ3 446 aaPredicted RBP4.75□□□□□ -1.65
CLK4-213ENST00000523013 WDYHV1Q96HA8 205 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 PPP1R9BQ96SB3 815 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 VN1R3Q9BXE9 311 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 CPNE7Q9UBL6 633 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 PAXBP1Q9Y5B6 917 aa4.75□□□□□ -1.65
CLK4-213ENST00000523013 CACNA1IQ9P0X4 2223 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 CAPN8A6NHC0 703 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 PYCARD-AS1I3L0S3 204 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 SOCS2O14508 198 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 FGBP02675 491 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 EPHA3P29320 983 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 PRKAR1BP31321 381 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 COPB1P53618 953 aaKnown RBP4.74□□□□□ -1.65
CLK4-213ENST00000523013 SUMO3P55854 103 aaPredicted RBP4.74□□□□□ -1.65
CLK4-213ENST00000523013 LARS2Q15031 903 aaKnown RBP4.74□□□□□ -1.65
CLK4-213ENST00000523013 LRRC41Q15345 812 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 SEC23BQ15437 767 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 INSCQ1MX18 579 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 ZNF260Q3ZCT1 412 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 C10orf25Q5T742 122 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 CACHD1Q5VU97 1274 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 APOA5Q6Q788 366 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 SHC4Q6S5L8 630 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 SUCLG2Q96I99 432 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 ZBTB45Q96K62 511 aaPredicted RBP4.74□□□□□ -1.65
CLK4-213ENST00000523013 L1RE1Q9UN81 338 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 USP22Q9UPT9 525 aa4.74□□□□□ -1.65
CLK4-213ENST00000523013 THRAP3Q9Y2W1 955 aaKnown RBP4.74□□□□□ -1.65
CLK4-213ENST00000523013 LY6G6EA0A0G2JKS1 128 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 LOC102723971A0A1B0GUV8 181 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 FAM227AF5H4B4 570 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 H7C4K7 107 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 AGPSO00116 658 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 CCP110O43303 1012 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 PRPF3O43395 683 aaKnown RBP4.73□□□□□ -1.65
CLK4-213ENST00000523013 RRP9O43818 475 aaKnown RBP4.73□□□□□ -1.65
CLK4-213ENST00000523013 RASAL1O95294 804 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 HGFP14210 728 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 PHKG2P15735 406 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 ATF7P17544 494 aaPredicted RBP4.73□□□□□ -1.65
CLK4-213ENST00000523013 KLRC1P26715 233 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 PLCD1P51178 756 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 CNN3Q15417 329 aaKnown RBP4.73□□□□□ -1.65
CLK4-213ENST00000523013 NPY5RQ15761 445 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 C4orf46Q504U0 113 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 ZNF517Q6ZMY9 492 aaPredicted RBP4.73□□□□□ -1.65
CLK4-213ENST00000523013 IRF2BP2Q7Z5L9 587 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 MRPL10Q7Z7H8 261 aaKnown RBP4.73□□□□□ -1.65
CLK4-213ENST00000523013 RAVER1Q8IY67 606 aaKnown RBP4.73□□□□□ -1.65
CLK4-213ENST00000523013 CHPFQ8IZ52 775 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 OSR1Q8TAX0 266 aaPredicted RBP4.73□□□□□ -1.65
CLK4-213ENST00000523013 MAP4K1Q92918 833 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 NMD3Q96D46 503 aaKnown RBP4.73□□□□□ -1.65
CLK4-213ENST00000523013 SACM1LQ9NTJ5 587 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 GAR1Q9NY12 217 aaKnown RBP4.73□□□□□ -1.65
CLK4-213ENST00000523013 MTMR4Q9NYA4 1195 aa4.73□□□□□ -1.65
CLK4-213ENST00000523013 H3BNC9 293 aa4.72□□□□□ -1.65
CLK4-213ENST00000523013 FRS3O43559 492 aa4.72□□□□□ -1.65
CLK4-213ENST00000523013 PRF1P14222 555 aa4.72□□□□□ -1.65
CLK4-213ENST00000523013 CREB1P16220 341 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms