RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 NT5C1AQ9BXI3 368 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 PLEKHA4Q9H4M7 779 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 IFNKQ9P0W0 207 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 AFF4Q9UHB7 1163 aaKnown RBP8.88□□□□□ -0.99
VPS13B-210ENST00000521932 DPP7Q9UHL4 492 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 DNAJC12Q9UKB3 198 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 GTF3C4Q9UKN8 822 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 MKL2Q9ULH7 1088 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 HCFC2Q9Y5Z7 792 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 TSC2P49815 1807 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 MYBPHLA2RUH7 354 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 AP5Z1O43299 807 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 CBFA2T2O43439 604 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 HCRTO43612 131 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 ATP2C2O75185 946 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 CLSTN1O94985 981 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 CSPG5O95196 566 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 GLUD1P00367 558 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 TPM3P06753 285 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 OR4Q2P0C623 313 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 CPB1P15086 417 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 FOSL2P15408 326 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 CD58P19256 250 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 ACAT1P24752 427 aaKnown RBP8.87□□□□□ -0.99
VPS13B-210ENST00000521932 CA8P35219 290 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 SERPINB4P48594 390 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 KLK7P49862 253 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 ZNF132P52740 706 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 RAD23BP54727 409 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 TSPY1Q01534 308 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 NFE2Q16621 373 aaPredicted RBP8.87□□□□□ -0.99
VPS13B-210ENST00000521932 CFAP221Q4G0U5 840 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 SLC39A12Q504Y0 691 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 FIGNQ5HY92 759 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 IQCEQ6IPM2 695 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 RAB44Q7Z6P3 723 aaPredicted RBP8.87□□□□□ -0.99
VPS13B-210ENST00000521932 PALB2Q86YC2 1186 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 TCEAL8Q8IYN2 117 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 SLC4A11Q8NBS3 891 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 B3GALNT2Q8NCR0 500 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 SPPL2BQ8TCT7 592 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 SHC3Q92529 594 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 FUBP3Q96I24 572 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS13B-210ENST00000521932 TWNKQ96RR1 684 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 LSM14BQ9BX40 385 aaKnown RBP8.87□□□□□ -0.99
VPS13B-210ENST00000521932 STK33Q9BYT3 514 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 XPO4Q9C0E2 1151 aaKnown RBP8.87□□□□□ -0.99
VPS13B-210ENST00000521932 GPR88Q9GZN0 384 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 ELOVL4Q9GZR5 314 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 DNAI2Q9GZS0 605 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 GANQ9H2C0 597 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 DPEP3Q9H4B8 488 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 ABCB6Q9NP58 842 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 BRD7Q9NPI1 651 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 CRTAC1Q9NQ79 661 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 FAM207AQ9NSI2 230 aaPredicted RBP8.87□□□□□ -0.99
VPS13B-210ENST00000521932 TMLHEQ9NVH6 421 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 CEP72Q9P209 647 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 HMGXB4Q9UGU5 601 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 KIAA1257Q9ULG3 409 aa8.87□□□□□ -0.99
VPS13B-210ENST00000521932 ITIH6Q6UXX5 1313 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 ATG2AQ2TAZ0 1938 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.86□□□□□ -0.99
VPS13B-210ENST00000521932 MTMR11A4FU01 709 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 KRBA1A5PL33 1030 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 FOXN3O00409 490 aaPredicted RBP8.86□□□□□ -0.99
VPS13B-210ENST00000521932 EPHB6O15197 1021 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 VNN2O95498 520 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 GLP2RO95838 553 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 IGHA1P01876 353 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 PAEPP09466 180 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 EPCAMP16422 314 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 TRIM21P19474 475 aaKnown RBP8.86□□□□□ -0.99
VPS13B-210ENST00000521932 GTF2F1P35269 517 aaKnown RBP eCLIP8.86□□□□□ -0.99
VPS13B-210ENST00000521932 ARPP19P56211 112 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 JAM2P57087 298 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 ADCY1Q08828 1119 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 DRAP1Q14919 205 aaPredicted RBP8.86□□□□□ -0.99
VPS13B-210ENST00000521932 ZNF394Q53GI3 561 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 TMEM270Q6UE05 265 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 PAQR9Q6ZVX9 377 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 ACOT1Q86TX2 421 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 GLYCTKQ8IVS8 523 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 FAM71AQ8IYT1 594 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 C12orf29Q8N999 325 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 KREMEN2Q8NCW0 462 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 VN1R2Q8NFZ6 395 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 NEK11Q8NG66 645 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 CASP10Q92851 521 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 PABPC5Q96DU9 382 aaKnown RBP8.86□□□□□ -0.99
VPS13B-210ENST00000521932 IQCDQ96DY2 449 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 PCED1BQ96HM7 432 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 HNRNPABQ99729 332 aaKnown RBP8.86□□□□□ -0.99
VPS13B-210ENST00000521932 NUP58Q9BVL2 599 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 EDEM3Q9BZQ6 932 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 TTYH3Q9C0H2 523 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 IGFLR1Q9H665 355 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 NEUROD4Q9HD90 331 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 FBXW11Q9UKB1 542 aa8.86□□□□□ -0.99
VPS13B-210ENST00000521932 AJAP1Q9UKB5 411 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms