RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 ZCCHC14Q8WYQ9 949 aaKnown RBP12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 OTUB2Q96DC9 234 aa12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 ANKRD36BP1Q96IX9 119 aa12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZFRQ96KR1 1074 aaKnown RBP12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 PCIF1Q9H4Z3 704 aa12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 CD248Q9HCU0 757 aa12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 SMPD4Q9NXE4 827 aa12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 CCDC39Q9UFE4 941 aa12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 FBXO2Q9UK22 296 aaPredicted RBP12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 STARD13Q9Y3M8 1113 aa12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 SRPRBQ9Y5M8 271 aaKnown RBP12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 LOC400499M0QZD8 3231 aa12.26□□□□□ -0.45
IGHV3-60-201ENST00000521678 PTPRDP23468 1912 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZNF233A6NK53 670 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 HOXC11O43248 304 aaPredicted RBP12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 PRPF6O94906 941 aaKnown RBP12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 CD2BP2O95400 341 aaKnown RBP12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 CST3P01034 146 aaPredicted RBP12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 ADH5P11766 374 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 CD59P13987 128 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 PTPN1P18031 435 aaKnown RBP12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 HOXD13P35453 343 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 FAM193AP78312 1265 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 CYP27A1Q02318 531 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 GAD2Q05329 585 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 GFPT1Q06210 699 aaPredicted RBP12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 ACAP1Q15027 740 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 TDRD10Q5VZ19 366 aaKnown RBP12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 KIAA1211LQ6NV74 962 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 SLC36A4Q6YBV0 504 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 ARMCX6Q7L4S7 300 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 TRAPPC11Q7Z392 1133 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 RAB44Q7Z6P3 723 aaPredicted RBP12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 TTC30AQ86WT1 665 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 HMGB4Q8WW32 186 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 OVCA2Q8WZ82 227 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 SLITRK1Q96PX8 696 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 MRPL45Q9BRJ2 306 aaKnown RBP12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 LHX6Q9UPM6 363 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 CLIC4Q9Y696 253 aa12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 SETXQ7Z333 2677 aaKnown RBP12.25□□□□□ -0.45
IGHV3-60-201ENST00000521678 A0A1W2PQF6 199 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 TCRBV21S2A2A0A5A6 115 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 TBC1D3BA6NDS4 549 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 SCAMP3O14828 347 aaKnown RBP12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 AP5Z1O43299 807 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 COCHO43405 550 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 TULP3O75386 442 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 GJB3O75712 270 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 TNNC2P02585 160 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZDHHC11BP0C7U3 371 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 GABRG2P18507 467 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 PI4KAP42356 2102 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 TCHHQ07283 1943 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 HNRNPDQ14103 355 aaKnown RBP12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZNF423Q2M1K9 1284 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 MDH1BQ5I0G3 518 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 CBWD2Q8IUF1 395 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 WDR49Q8IV35 697 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 NUP93Q8N1F7 819 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 CHCHD4Q8N4Q1 142 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 B3GNT5Q9BYG0 378 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZNF518BQ9C0D4 1074 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 KIAA1586Q9HCI6 787 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZDHHC4Q9NPG8 344 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 PANK4Q9NVE7 773 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 DNAAF2Q9NVR5 837 aaKnown RBP12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 BCCIPQ9P287 314 aaKnown RBP eCLIP12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 DEC1Q9P2X7 70 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 SMC3Q9UQE7 1217 aa12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 R3HCC1Q9Y3T6 440 aaKnown RBP12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 MORC2Q9Y6X9 1032 aaPredicted RBP12.24□□□□□ -0.45
IGHV3-60-201ENST00000521678 FAM92AA1XBS5 289 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 TULP1O00294 542 aaPredicted RBP12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 STAU1O95793 577 aaKnown RBP12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 ABL1P00519 1130 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 CFIP05156 583 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 MBL2P11226 248 aaPredicted RBP12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 IDEP14735 1019 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 YWHAQP27348 245 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 NTSR1P30989 418 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 RDXP35241 583 aaKnown RBP12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 RPL6Q02878 288 aaKnown RBP12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZNF33AQ06730 810 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 SLC14A1Q13336 389 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 C8orf34Q49A92 452 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 PREPLQ4J6C6 727 aaPredicted RBP12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 TRMT11Q7Z4G4 463 aaKnown RBP12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 RABEPKQ7Z6M1 372 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 PROSER1Q86XN7 944 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 TMEM25Q86YD3 366 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 MIB1Q86YT6 1006 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 SLC41A1Q8IVJ1 513 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 HDDC3Q8N4P3 179 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 PDZD8Q8NEN9 1154 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 WBP2Q969T9 261 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZNF419Q96HQ0 510 aaPredicted RBP12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 CLIC6Q96NY7 704 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms