RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 AASDHPPTQ9NRN7 309 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 ASB6Q9NWX5 421 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 TMOD3Q9NYL9 352 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 ARPP21Q9UBL0 812 aaPredicted RBP3.96□□□□□ -1.78
VPS13B-209ENST00000521559 WNT6Q9Y6F9 365 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 PLCH1Q4KWH8 1693 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.95□□□□□ -1.78
VPS13B-209ENST00000521559 FAM208AQ9UK61 1670 aaKnown RBP3.95□□□□□ -1.78
VPS13B-209ENST00000521559 THSD7AQ9UPZ6 1657 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 CEMIPQ8WUJ3 1361 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 E2F8A0AVK6 867 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 WDR27A2RRH5 827 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 PRSS29PA6NIE9 313 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 H3BUI4 141 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 CHL1O00533 1208 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 KIF20AO95235 890 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 ZNF37AP17032 561 aaPredicted RBP3.95□□□□□ -1.78
VPS13B-209ENST00000521559 GCLCP48506 637 aaPredicted RBP3.95□□□□□ -1.78
VPS13B-209ENST00000521559 MAP2K6P52564 334 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 CALD1Q05682 793 aaKnown RBP3.95□□□□□ -1.78
VPS13B-209ENST00000521559 COLEC12Q5KU26 742 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 RBM20Q5T481 1227 aaKnown RBP3.95□□□□□ -1.78
VPS13B-209ENST00000521559 EMC10Q5UCC4 262 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 ZKSCAN2Q63HK3 967 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 LAYNQ6UX15 382 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 WDR63Q8IWG1 891 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 SH2D3CQ8N5H7 860 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 ATRIPQ8WXE1 791 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 FKBP10Q96AY3 582 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 C1GALT1C1Q96EU7 318 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 ACTRT3Q9BYD9 372 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 IL17RBQ9NRM6 502 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 CNNM1Q9NRU3 951 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 BABAM1Q9NWV8 329 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 DDX56Q9NY93 547 aaKnown RBP3.95□□□□□ -1.78
VPS13B-209ENST00000521559 ASAP1Q9ULH1 1129 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 KDM6AO15550 1401 aaPredicted RBP3.95□□□□□ -1.78
VPS13B-209ENST00000521559 ADGRA2Q96PE1 1338 aa3.95□□□□□ -1.78
VPS13B-209ENST00000521559 PCSK5Q92824 1860 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 LTN1O94822 1766 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 MAP2P11137 1827 aaKnown RBP3.94□□□□□ -1.78
VPS13B-209ENST00000521559 LRRC3CA6NJW4 275 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 LINC00473A8K010 186 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 M0QYG6 137 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 KCNQ3O43525 872 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 VPS4BO75351 444 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 OFD1O75665 1012 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 C1QL1O75973 258 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 ATXN1LP0C7T5 689 aaKnown RBP3.94□□□□□ -1.78
VPS13B-209ENST00000521559 ZNF853P0CG23 659 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 ZFXP17010 805 aaPredicted RBP3.94□□□□□ -1.78
VPS13B-209ENST00000521559 NDUFB7P17568 137 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 HMGB2P26583 209 aaKnown RBP3.94□□□□□ -1.78
VPS13B-209ENST00000521559 PHKA1P46020 1223 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 ALDH9A1P49189 494 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 SLC39A6Q13433 755 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 ZNF618Q5T7W0 954 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 SUMO4Q6EEV6 95 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 ZNF790Q6PG37 636 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 ZNF551Q7Z340 670 aaPredicted RBP3.94□□□□□ -1.78
VPS13B-209ENST00000521559 PPP1R32Q7Z5V6 425 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 DEFB132Q7Z7B7 95 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 CATIPQ7Z7H3 387 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 SLC35A4Q96G79 324 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 CAMKK2Q96RR4 588 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 GTPBP4Q9BZE4 634 aaKnown RBP3.94□□□□□ -1.78
VPS13B-209ENST00000521559 MIS18AQ9NYP9 233 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 IP6K2Q9UHH9 426 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 PNMA8BQ9ULN7 279 aaPredicted RBP3.94□□□□□ -1.78
VPS13B-209ENST00000521559 PCDHA1Q9Y5I3 950 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 RGPD1P0DJD0 1748 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 IL16Q14005 1332 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 ZNF521Q96K83 1311 aa3.94□□□□□ -1.78
VPS13B-209ENST00000521559 TLR5O60602 858 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 RBMXL2O75526 392 aaKnown RBP3.93□□□□□ -1.78
VPS13B-209ENST00000521559 ONECUT2O95948 504 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 S100BP04271 92 aaPredicted RBP3.93□□□□□ -1.78
VPS13B-209ENST00000521559 PDGFRBP09619 1106 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 NR2F6P10588 404 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 PF4V1P10720 104 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 LMO1P25800 156 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 KCNJ5P48544 419 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 EIF4A1P60842 406 aaKnown RBP3.93□□□□□ -1.78
VPS13B-209ENST00000521559 NKX6-1P78426 367 aaPredicted RBP3.93□□□□□ -1.78
VPS13B-209ENST00000521559 IQCB1Q15051 598 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 TBCCQ15814 346 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 EZH2Q15910 746 aaKnown RBP3.93□□□□□ -1.78
VPS13B-209ENST00000521559 LONRF3Q496Y0 759 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 KHDC1LQ5JSQ8 128 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 ATAT1Q5SQI0 421 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 IFIT1BQ5T764 474 aaKnown RBP3.93□□□□□ -1.78
VPS13B-209ENST00000521559 ICE2Q659A1 982 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 FCRLBQ6BAA4 426 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 ZNF788Q6ZQV5 615 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 PPP1R3BQ86XI6 285 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 TTC5Q8N0Z6 440 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 FAM109AQ8N4B1 249 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 FAM46DQ8NEK8 389 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 HASPINQ8TF76 798 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms