RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 KIAA1191Q96A73 305 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 SCLT1Q96NL6 688 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 AMBRA1Q9C0C7 1298 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 SMURF2Q9HAU4 748 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 A1CFQ9NQ94 594 aaKnown RBP4.82□□□□□ -1.64
SQLE-204ENST00000520493 TM7SF3Q9NS93 570 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 STK32BQ9NY57 414 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 GTF2A1LQ9UNN4 478 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 AGAP1Q9UPQ3 857 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 LZTS1Q9Y250 596 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 PLEKHM1Q9Y4G2 1056 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 MORC2Q9Y6X9 1032 aaPredicted RBP4.82□□□□□ -1.64
SQLE-204ENST00000520493 VWC2LB2RUY7 222 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 F8W8V4 182 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 FFAR2O15552 330 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 THAP12O43422 761 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 NBNO60934 754 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 AHSGP02765 367 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 ATXN1LP0C7T5 689 aaKnown RBP4.81□□□□□ -1.64
SQLE-204ENST00000520493 HDCP19113 662 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 ALDH9A1P49189 494 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 LOXL3P58215 753 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 EXOSC9Q06265 439 aaKnown RBP4.81□□□□□ -1.64
SQLE-204ENST00000520493 SLC13A2Q13183 592 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 BLMHQ13867 455 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 ICE2Q659A1 982 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 LMBRD2Q68DH5 695 aaPredicted RBP4.81□□□□□ -1.64
SQLE-204ENST00000520493 FCRLBQ6BAA4 426 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 TMEM108Q6UXF1 575 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 SKAP1Q86WV1 359 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 MICU3Q86XE3 530 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 SRRM1Q8IYB3 904 aaKnown RBP4.81□□□□□ -1.64
SQLE-204ENST00000520493 CCDC33Q8N5R6 958 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 TEX19Q8NA77 164 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 FANCBQ8NB91 859 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 PCSK9Q8NBP7 692 aaKnown RBP4.81□□□□□ -1.64
SQLE-204ENST00000520493 CCT6BQ92526 530 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 IQCDQ96DY2 449 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 STK33Q9BYT3 514 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 ARHGEF3Q9NR81 526 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 SACM1LQ9NTJ5 587 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.81□□□□□ -1.64
SQLE-204ENST00000520493 CEP83Q9Y592 693 aa4.81□□□□□ -1.64
SQLE-204ENST00000520493 SKAP2O75563 359 aaPredicted RBP4.8□□□□□ -1.64
SQLE-204ENST00000520493 MT-ND5P03915 603 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 ELFN1P0C7U0 828 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 XRCC6P12956 609 aaKnown RBP eCLIP4.8□□□□□ -1.64
SQLE-204ENST00000520493 FGFR2P21802 821 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 DRD4P21917 467 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 EEF1GP26641 437 aaKnown RBP4.8□□□□□ -1.64
SQLE-204ENST00000520493 HSPA7P48741 367 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 SRSF4Q08170 494 aaKnown RBP4.8□□□□□ -1.64
SQLE-204ENST00000520493 FOXO1Q12778 655 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 EIF2B5Q13144 721 aaKnown RBP4.8□□□□□ -1.64
SQLE-204ENST00000520493 IQCB1Q15051 598 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 PUM3Q15397 648 aaKnown RBP4.8□□□□□ -1.64
SQLE-204ENST00000520493 ELF2Q15723 593 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 MPEG1Q2M385 716 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 ZNF804AQ7Z570 1209 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 ZNF527Q8NB42 609 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 MAML1Q92585 1016 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 RFKQ969G6 155 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 SNX22Q96L94 193 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 SLC46A1Q96NT5 459 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 P2RX7Q99572 595 aaKnown RBP4.8□□□□□ -1.64
SQLE-204ENST00000520493 TTYH3Q9C0H2 523 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 MRPS18AQ9NVS2 196 aaKnown RBP4.8□□□□□ -1.64
SQLE-204ENST00000520493 SWAP70Q9UH65 585 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 DGKBQ9Y6T7 804 aa4.8□□□□□ -1.64
SQLE-204ENST00000520493 A0A087WWL8 130 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 MANSC4A6NHS7 340 aaPredicted RBP4.79□□□□□ -1.64
SQLE-204ENST00000520493 INMTO95050 263 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 CSTBP04080 98 aaKnown RBP4.79□□□□□ -1.64
SQLE-204ENST00000520493 PRKCGP05129 697 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 CYP2C9P11712 490 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 KLRC1P26715 233 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 ITPKBP27987 946 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 CTGFP29279 349 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 PXNP49023 591 aaPredicted RBP4.79□□□□□ -1.64
SQLE-204ENST00000520493 WNT3P56703 355 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 PROK1P58294 105 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 RPS16P62249 146 aaKnown RBP4.79□□□□□ -1.64
SQLE-204ENST00000520493 SLC10A2Q12908 348 aaPredicted RBP4.79□□□□□ -1.64
SQLE-204ENST00000520493 BIRC3Q13489 604 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 PMS2P11Q13670 270 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 TRIM14Q14142 442 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 STARD3Q14849 445 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 SLC35G1Q2M3R5 365 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 CCDC38Q502W7 563 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 VPS53Q5VIR6 699 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 CEP85Q6P2H3 762 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 USP17L6PQ6QN14 398 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 SLC29A4Q7RTT9 530 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 KRT73Q86Y46 540 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 FAM109AQ8N4B1 249 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 ZNF566Q969W8 418 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 MYLK2Q9H1R3 596 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 TMEM8AQ9HCN3 771 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 NECTIN3Q9NQS3 549 aa4.79□□□□□ -1.64
SQLE-204ENST00000520493 SERTAD4Q9NUC0 356 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms