RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SLC30A5Q8TAD4 765 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 SHKBP1Q8TBC3 707 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 MYCBPAPQ8TBZ2 947 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 TATDN2Q93075 761 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 PSMG2Q969U7 264 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 MCRS1Q96EZ8 462 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 PCED1BQ96HM7 432 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 CHP1Q99653 195 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 GPR88Q9GZN0 384 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 DEF6Q9H4E7 631 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 SLITRK6Q9H5Y7 841 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 ABCB6Q9NP58 842 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 NLRC4Q9NPP4 1024 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 FAM49BQ9NUQ9 324 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 TMEM30AQ9NV96 361 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.03□□□□□ -1.12
SDCBP-206ENST00000519115 EPS15L1Q9UBC2 864 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 HSFX1Q9UBD0 423 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 LCMT1Q9UIC8 334 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 CDH7Q9ULB5 785 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 PYCARDQ9ULZ3 195 aa8.03□□□□□ -1.12
SDCBP-206ENST00000519115 MAGED2Q9UNF1 606 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-206ENST00000519115 A0A1W2PRU2 124 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 SOWAHDA6NJG2 315 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 MOSPD3O75425 235 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 CCDC130P13994 396 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 ACO1P21399 889 aaKnown RBP8.02□□□□□ -1.13
SDCBP-206ENST00000519115 GABRR2P28476 465 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 GRIK1P39086 918 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 MAGEA1P43355 309 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 MAGEA11P43364 429 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 KIF11P52732 1056 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 VAV2P52735 878 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 ZNF132P52740 706 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 TERF1P54274 439 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 CACNA2D1P54289 1103 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 EPHA5P54756 1037 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 HADHBP55084 474 aaKnown RBP8.02□□□□□ -1.13
SDCBP-206ENST00000519115 RPL10AP62906 217 aaKnown RBP8.02□□□□□ -1.13
SDCBP-206ENST00000519115 CYP4F8P98187 520 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 CDR2Q01850 454 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 KIF5AQ12840 1032 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 HTR4Q13639 388 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 RAPGEF1Q13905 1077 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 TEAD2Q15562 447 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 MAPRE1Q15691 268 aaKnown RBP8.02□□□□□ -1.13
SDCBP-206ENST00000519115 CFAP221Q4G0U5 840 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 ZNF394Q53GI3 561 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 STXBP5Q5T5C0 1151 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 ALKBH5Q6P6C2 394 aaKnown RBP8.02□□□□□ -1.13
SDCBP-206ENST00000519115 GAREM2Q75VX8 874 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 ITIH5Q86UX2 942 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 FAM35AQ86V20 835 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 UNC93AQ86WB7 457 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 PPM1KQ8N3J5 372 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 FUBP3Q96I24 572 aaKnown RBP eCLIP8.02□□□□□ -1.13
SDCBP-206ENST00000519115 TNIP3Q96KP6 325 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 ZSWIM3Q96MP5 696 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 KREMEN1Q96MU8 473 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 TWNKQ96RR1 684 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 KXD1Q9BQD3 176 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 MED10Q9BTT4 135 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 RPP25Q9BUL9 199 aaKnown RBP8.02□□□□□ -1.13
SDCBP-206ENST00000519115 LRRC3Q9BY71 257 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 B3GNT5Q9BYG0 378 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 ELOVL4Q9GZR5 314 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 ISCUQ9H1K1 167 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 LHX5Q9H2C1 402 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 OCEL1Q9H607 264 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 KCNK12Q9HB15 430 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 AVENQ9NQS1 362 aaPredicted RBP8.02□□□□□ -1.13
SDCBP-206ENST00000519115 KRT82Q9NSB4 513 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 ADAMTS1Q9UHI8 967 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 NAGPAQ9UK23 515 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 NENFQ9UMX5 172 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 SORCS3Q9UPU3 1222 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 ASB3Q9Y575 518 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 PCDHA13Q9Y5I0 950 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 COL4A3Q01955 1670 aa8.02□□□□□ -1.13
SDCBP-206ENST00000519115 ANKRD62A6NC57 917 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 SLC38A8A6NNN8 435 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 F8VP50 259 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 PI4K2BG5E9Z4 385 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 ZNF197O14709 1029 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 NARSO43776 548 aaKnown RBP8.01□□□□□ -1.13
SDCBP-206ENST00000519115 RTN2O75298 545 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 CILPO75339 1184 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 LSM8O95777 96 aaKnown RBP8.01□□□□□ -1.13
SDCBP-206ENST00000519115 MYBL1P10243 752 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 ALADP13716 330 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 CYP11B1P15538 503 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 PRLRP16471 622 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 HMGA1P17096 107 aaKnown RBP8.01□□□□□ -1.13
SDCBP-206ENST00000519115 TNFAIP3P21580 790 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 ADORA2BP29275 332 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 ZXDAP98168 799 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 INCA1Q0VD86 236 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 IFRD2Q12894 506 aaPredicted RBP8.01□□□□□ -1.13
SDCBP-206ENST00000519115 ARHGAP29Q52LW3 1261 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 PARM1Q6UWI2 310 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms