RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SRP54P61011 504 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 POLR2FP61218 127 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 RPS3AP61247 264 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAGOHP61326 146 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 UBXN2AP68543 259 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ECT2LQ008S8 904 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 LRRC63Q05C16 580 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 RAD51Q06609 339 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 KRT81Q14533 505 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ACAP1Q15027 740 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 UBE3CQ15386 1083 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 TGFBIQ15582 683 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CNGA2Q16280 664 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 MOGQ16653 247 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CWF19L2Q2TBE0 894 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 KRT71Q3SY84 523 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 RALGPS1Q5JS13 557 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 C6orf183Q5T699 404 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ATAD3BQ5T9A4 648 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 SPOPLQ6IQ16 392 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF449Q6P9G9 518 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 HDDC2Q7Z4H3 204 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 REC114Q7Z4M0 266 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 GPR141Q7Z602 305 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 GALNT7Q86SF2 657 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CREG2Q8IUH2 290 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CLVS1Q8IUQ0 354 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 LRRC34Q8IZ02 419 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 LINC00301Q8NCQ3 95 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CATSPER1Q8NEC5 780 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZSCAN18Q8TBC5 510 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 PRPF31Q8WWY3 499 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 PRCCQ92733 491 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 DPF2Q92785 391 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 BRF1Q92994 677 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 RNF34Q969K3 372 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAGOHBQ96A72 148 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 NMD3Q96D46 503 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 MRRFQ96E11 262 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 TNIP3Q96KP6 325 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CAPZA3Q96KX2 299 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 FNBP1Q96RU3 617 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 PLEKHF1Q96S99 279 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 SECISBP2Q96T21 854 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CIB1Q99828 191 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ECSITQ9BQ95 431 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 PYM1Q9BRP8 204 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CENPOQ9BU64 300 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 MRPL9Q9BYD2 267 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 IFIH1Q9BYX4 1025 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 TRIM15Q9C019 465 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 VPS33BQ9H267 617 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 SMARCAD1Q9H4L7 1026 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 PSTPIP2Q9H939 334 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 SCPEP1Q9HB40 452 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 EPB41L5Q9HCM4 733 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 UBN1Q9NPG3 1134 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF277Q9NRM2 450 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 VPS45Q9NRW7 570 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ABHD10Q9NUJ1 306 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 PPP1R14DQ9NXH3 145 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 C9orf78Q9NZ63 289 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 UBP1Q9NZI7 540 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLAMF8Q9P0V8 285 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 GMIPQ9P107 970 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 SUCOQ9UBS9 1254 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 IP6K2Q9UHH9 426 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ATP6V1HQ9UI12 483 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 UTP11Q9Y3A2 253 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 RRP7AQ9Y3A4 280 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 NOC2LQ9Y3T9 749 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ANKARQ7Z5J8 1434 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CROCC2H7BZ55 1655 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 PBRM1Q86U86 1689 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 AKAP12Q02952 1782 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 TARBP1Q13395 1621 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 A0A1W2PQC6 194 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 GTPBP10A4D1E9 387 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF839A8K0R7 811 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 WASH4PA8MWX3 477 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 FAM25AB3EWG3 89 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 FAM25CB3EWG5 89 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 FAM25GB3EWG6 89 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 F8W810 466 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 H0YGN5 161 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 APOL1O14791 398 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 CAPN9O14815 690 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 RASGRF2O14827 1237 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 RGS16O15492 202 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PEX1O43933 1283 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 GREM1O60565 184 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 DAB1O75553 588 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 TNFAIP8O95379 198 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PSMG1O95456 288 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 RECKO95980 971 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PRLP01236 227 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 RPN1P04843 607 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 ABCB1P08183 1280 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 NUDT17P0C025 328 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 KRT3P12035 628 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms