RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 TMEM65Q6PI78 240 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 B3GNT9Q6UX72 402 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 NRACQ8N912 160 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 PPP1R35Q8TAP8 253 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 DNAJB14Q8TBM8 379 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 NSMCE1Q8WV22 266 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 LRGUKQ96M69 825 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 NT5C1BQ96P26 610 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 TAAR9Q96RI9 348 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 ACO2Q99798 780 aaKnown RBP3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 VN1R3Q9BXE9 311 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 ZMAT3Q9HA38 289 aaKnown RBP3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 SMURF2Q9HAU4 748 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 TRIM36Q9NQ86 728 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 GAR1Q9NY12 217 aaKnown RBP3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 MAFFQ9ULX9 164 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 CDY1Q9Y6F8 540 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 LOC102723971A0A1B0GUV8 181 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 TMEM233B4DJY2 109 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 AKAP10O43572 662 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 RGS10O43665 173 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 TMPRSS11DO60235 418 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 SRGAP2O75044 1071 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 RASAL1O95294 804 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 CREB1P16220 341 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 SLC7A1P30825 629 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 UQCRC1P31930 480 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 DIO1P49895 249 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 ANAPC15P60006 121 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 HTRA4P83105 476 aaPredicted RBP3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 RAPGEF1Q13905 1077 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 LARS2Q15031 903 aaKnown RBP3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 RBMS2Q15434 407 aaKnown RBP3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 DCAF12L1Q5VU92 463 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 VSTM1Q6UX27 236 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 LIX1LQ8IVB5 337 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 SAMD14Q8IZD0 417 aaPredicted RBP3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 LINC01465Q8N7H1 131 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 NGDNQ8NEJ9 315 aaKnown RBP3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 IL31RAQ8NI17 732 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 OSR1Q8TAX0 266 aaPredicted RBP3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 PNISRQ8TF01 805 aaKnown RBP3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 SPSB4Q96A44 273 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 SIGLEC11Q96RL6 698 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 EBF3Q9H4W6 596 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 MTMR4Q9NYA4 1195 aa3.6□□□□□ -1.83
RNU4-49P-201ENST00000516080 LY6G6EA0A0G2JKS1 128 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 MBD3L4A6NDZ8 208 aaPredicted RBP3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 MBD3L3A6NE82 208 aaPredicted RBP3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 CCP110O43303 1012 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 RFPL1O75677 317 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 TUSC2O75896 110 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 U2AF1L5P0DN76 240 aaPredicted RBP3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 CBSLP0DN79 551 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 APEHP13798 732 aaKnown RBP3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 PRF1P14222 555 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 SCP2P22307 547 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 TKTP29401 623 aaKnown RBP3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 CBSP35520 551 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 RAB27AP51159 221 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 TIRAPP58753 221 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 U2AF1Q01081 240 aaKnown RBP eCLIP3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 TIAL1Q01085 375 aaKnown RBP eCLIP3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 CACHD1Q5VU97 1274 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 CRELD2Q6UXH1 353 aaPredicted RBP3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 NPNTQ6UXI9 565 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 RANBP10Q6VN20 620 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 DEF8Q6ZN54 512 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 DCDC5Q6ZRR9 648 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 IRF2BP2Q7Z5L9 587 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 ZDHHC17Q8IUH5 632 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 TPH2Q8IWU9 490 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 ZBTB34Q8NCN2 500 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 MAP4K1Q92918 833 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 CTHRC1Q96CG8 243 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 GPATCH3Q96I76 525 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 VCPIP1Q96JH7 1222 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 HS6ST2Q96MM7 605 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 TMEM60Q9H2L4 133 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 ATP6V0A4Q9HBG4 840 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 MGAT4CQ9UBM8 478 aa3.59□□□□□ -1.83
RNU4-49P-201ENST00000516080 hCG_2014768A0A024R1R8 64 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 ANKRD62A6NC57 917 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 TRIM43BA6NCK2 446 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 FAM90A10PA6NDY2 464 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 CAPN8A6NHC0 703 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 ISM1B1AKI9 464 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 H3BNC9 293 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 CD3EAPO15446 510 aaKnown RBP3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 CTNND1O60716 968 aaKnown RBP3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 PDGFRBP09619 1106 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 KLRC1P26715 233 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 CCKBRP32239 447 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 GATMP50440 423 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 EPHB1P54762 984 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 ID2Q02363 134 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZNF91Q05481 1191 aa3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 SRSF1Q07955 248 aaKnown RBP eCLIP3.58□□□□□ -1.84
RNU4-49P-201ENST00000516080 TMTC4Q5T4D3 741 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms