RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 SAMD14Q8IZD0 417 aaPredicted RBP4.82□□□□□ -1.64
LINC01088-211ENST00000515597 MAGEB6Q8N7X4 407 aa4.82□□□□□ -1.64
LINC01088-211ENST00000515597 BPIFB1Q8TDL5 484 aa4.82□□□□□ -1.64
LINC01088-211ENST00000515597 FAM118BQ9BPY3 351 aa4.82□□□□□ -1.64
LINC01088-211ENST00000515597 TMEM79Q9BSE2 394 aa4.82□□□□□ -1.64
LINC01088-211ENST00000515597 BRIP1Q9BX63 1249 aa4.82□□□□□ -1.64
LINC01088-211ENST00000515597 EBF3Q9H4W6 596 aa4.82□□□□□ -1.64
LINC01088-211ENST00000515597 ZSCAN32Q9NX65 697 aa4.82□□□□□ -1.64
LINC01088-211ENST00000515597 MTMR4Q9NYA4 1195 aa4.82□□□□□ -1.64
LINC01088-211ENST00000515597 NOB1Q9ULX3 412 aaKnown RBP4.82□□□□□ -1.64
LINC01088-211ENST00000515597 SNX14Q9Y5W7 946 aa4.82□□□□□ -1.64
LINC01088-211ENST00000515597 MBD3L4A6NDZ8 208 aaPredicted RBP4.81□□□□□ -1.64
LINC01088-211ENST00000515597 MBD3L3A6NE82 208 aaPredicted RBP4.81□□□□□ -1.64
LINC01088-211ENST00000515597 UBE2Q2LH0YL09 131 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 AP4M1O00189 453 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 FCHO1O14526 889 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 S100BP04271 92 aaPredicted RBP4.81□□□□□ -1.64
LINC01088-211ENST00000515597 TKTP29401 623 aaKnown RBP4.81□□□□□ -1.64
LINC01088-211ENST00000515597 PRKAG1P54619 331 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
LINC01088-211ENST00000515597 PPP2R5AQ15172 486 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 CERCAMQ5T4B2 595 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 APOA5Q6Q788 366 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 IRF2BP2Q7Z5L9 587 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 CAND1Q86VP6 1230 aaKnown RBP4.81□□□□□ -1.64
LINC01088-211ENST00000515597 ANKRD13AQ8IZ07 590 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 MPP5Q8N3R9 675 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 RAPGEF4Q8WZA2 1011 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 NMD3Q96D46 503 aaKnown RBP4.81□□□□□ -1.64
LINC01088-211ENST00000515597 MMS19Q96T76 1030 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 EFHD1Q9BUP0 239 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 DPCDQ9BVM2 203 aaPredicted RBP4.81□□□□□ -1.64
LINC01088-211ENST00000515597 A1CFQ9NQ94 594 aaKnown RBP4.81□□□□□ -1.64
LINC01088-211ENST00000515597 RGS17Q9UGC6 210 aaPredicted RBP4.81□□□□□ -1.64
LINC01088-211ENST00000515597 EID1Q9Y6B2 187 aa4.81□□□□□ -1.64
LINC01088-211ENST00000515597 USP19O94966 1318 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 TCRBV5S1A1TA0A578 114 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 TRIM43BA6NCK2 446 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 A6NNZ2 444 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 ISM1B1AKI9 464 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 ZDHHC24Q6UX98 284 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 OR56A3Q8NH54 315 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 PIGOQ8TEQ8 1089 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 PPP2R3CQ969Q6 453 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 SPSB4Q96A44 273 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 TRIM43Q96BQ3 446 aaPredicted RBP4.8□□□□□ -1.64
LINC01088-211ENST00000515597 PRR25Q96S07 402 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 ASIC5Q9NY37 505 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 STK32BQ9NY57 414 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 DNMT3BQ9UBC3 853 aaKnown RBP4.8□□□□□ -1.64
LINC01088-211ENST00000515597 CDY1Q9Y6F8 540 aa4.8□□□□□ -1.64
LINC01088-211ENST00000515597 CNTNAP2Q9UHC6 1331 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 CFAP69A5D8W1 941 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 MYMKA6NI61 221 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 H3BNC9 293 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 CCP110O43303 1012 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 FGBP02675 491 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 KLRC1P26715 233 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 CACNB3P54284 484 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 BCAT1P54687 386 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 SUMO3P55854 103 aaPredicted RBP4.79□□□□□ -1.64
LINC01088-211ENST00000515597 PSG6Q00889 435 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 CCNIQ14094 377 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 FAM187BQ17R55 369 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 INSCQ1MX18 579 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 TRIM71Q2Q1W2 868 aaKnown RBP4.79□□□□□ -1.64
LINC01088-211ENST00000515597 PTCHD3Q3KNS1 767 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 MRPL10Q7Z7H8 261 aaKnown RBP4.79□□□□□ -1.64
LINC01088-211ENST00000515597 ZDHHC17Q8IUH5 632 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 SPARTQ8N0X7 666 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 C16orf52Q8NHV5 167 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 ADAMTS15Q8TE58 950 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 TMEM171Q8WVE6 324 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 COQ8BQ96D53 544 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 PPP1R9BQ96SB3 815 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 C17orf80Q9BSJ5 609 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 TRIM5Q9C035 493 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 FAM204AQ9H8W3 233 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 GBA2Q9HCG7 927 aaPredicted RBP4.79□□□□□ -1.64
LINC01088-211ENST00000515597 CPNE7Q9UBL6 633 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 TPCN1Q9ULQ1 816 aa4.79□□□□□ -1.64
LINC01088-211ENST00000515597 PYCARD-AS1I3L0S3 204 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 M0R3H8 397 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 DSCR3O14972 297 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 CBSLP0DN79 551 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 MYCLP12524 364 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-211ENST00000515597 PRF1P14222 555 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 HOXD9P28356 352 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-211ENST00000515597 GKP32189 559 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 CBSP35520 551 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-211ENST00000515597 MLC1Q15049 377 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 RBMS2Q15434 407 aaKnown RBP4.78□□□□□ -1.64
LINC01088-211ENST00000515597 ARHGAP29Q52LW3 1261 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 AWAT1Q58HT5 328 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 ZNF813Q6ZN06 617 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 BCDIN3DQ7Z5W3 292 aaKnown RBP4.78□□□□□ -1.64
LINC01088-211ENST00000515597 JDP2Q8WYK2 163 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 ADGRE3Q9BY15 652 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 AFF4Q9UHB7 1163 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms