RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 UPK3BL1B0FP48 263 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 UPK3BL2E5RIL1 263 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 AP5Z1O43299 807 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 HOXB3P14651 431 aaPredicted RBP16.77■□□□□ 0.28
LMNA-223ENST00000515459 ITPKAP23677 461 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 SIM1P81133 766 aaPredicted RBP16.77■□□□□ 0.28
LMNA-223ENST00000515459 GAD2Q05329 585 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 IFRD2Q12894 506 aaPredicted RBP16.77■□□□□ 0.28
LMNA-223ENST00000515459 SEMA3BQ13214 749 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 C8orf34Q49A92 452 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 LY6G5CQ5SRR4 150 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 CCDC73Q6ZRK6 1079 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 PIP4P1Q86T03 277 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 CBWD2Q8IUF1 395 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 WDR49Q8IV35 697 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 HDDC3Q8N4P3 179 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 OR6B3Q8NGW1 331 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 CEP76Q8TAP6 659 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 KCNV2Q8TDN2 545 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 OTUB2Q96DC9 234 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 CLIC6Q96NY7 704 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 MRPL45Q9BRJ2 306 aaKnown RBP16.77■□□□□ 0.28
LMNA-223ENST00000515459 ELOVL4Q9GZR5 314 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 KLK13Q9UKR3 277 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 SLC6A14Q9UN76 642 aa16.77■□□□□ 0.28
LMNA-223ENST00000515459 MYO18AQ92614 2054 aaKnown RBP16.77■□□□□ 0.27
LMNA-223ENST00000515459 SPAARA0A1B0GVQ0 90 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 E2F8A0AVK6 867 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 TBC1D3BA6NDS4 549 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 TACC1O75410 805 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 PTPN1P18031 435 aaKnown RBP16.76■□□□□ 0.27
LMNA-223ENST00000515459 RDXP35241 583 aaKnown RBP16.76■□□□□ 0.27
LMNA-223ENST00000515459 STAT6P42226 847 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 RPL6Q02878 288 aaKnown RBP16.76■□□□□ 0.27
LMNA-223ENST00000515459 GFPT1Q06210 699 aaPredicted RBP16.76■□□□□ 0.27
LMNA-223ENST00000515459 DUOXA1Q1HG43 343 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 PREPLQ4J6C6 727 aaPredicted RBP16.76■□□□□ 0.27
LMNA-223ENST00000515459 BTBD8Q5XKL5 378 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 NUDT18Q6ZVK8 323 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 STXBP4Q6ZWJ1 553 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 TRAPPC11Q7Z392 1133 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 TRMT11Q7Z4G4 463 aaKnown RBP16.76■□□□□ 0.27
LMNA-223ENST00000515459 PHTF2Q8N3S3 785 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 ZNF513Q8N8E2 541 aaPredicted RBP16.76■□□□□ 0.27
LMNA-223ENST00000515459 PDZD8Q8NEN9 1154 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 NME7Q9Y5B8 376 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 AKAP13Q12802 2813 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 ZZEF1O43149 2961 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 SPEGQ15772 3267 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 GON4LQ3T8J9 2241 aa16.76■□□□□ 0.27
LMNA-223ENST00000515459 H0Y626 953 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 RTN3O95197 1032 aaPredicted RBP16.75■□□□□ 0.27
LMNA-223ENST00000515459 TRIM16O95361 564 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 SERPINF2P08697 491 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 FAM163BP0C2L3 166 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 YWHAQP27348 245 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 CACNA2D1P54289 1103 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 SLC36A4Q6YBV0 504 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 RABEPKQ7Z6M1 372 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 CCDC65Q8IXS2 484 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 NUP93Q8N1F7 819 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 NAT16Q8N8M0 369 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 OVCA2Q8WZ82 227 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 GTPBP2Q9BX10 602 aaKnown RBP16.75■□□□□ 0.27
LMNA-223ENST00000515459 ZNF518BQ9C0D4 1074 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 KIAA1586Q9HCI6 787 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 TMEM30AQ9NV96 361 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 HSPBP1Q9NZL4 362 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 SH3BP1Q9Y3L3 701 aa16.75■□□□□ 0.27
LMNA-223ENST00000515459 VPS37CA5D8V6 355 aaPredicted RBP16.74■□□□□ 0.27
LMNA-223ENST00000515459 COCHO43405 550 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 OPHN1O60890 802 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 CST3P01034 146 aaPredicted RBP16.74■□□□□ 0.27
LMNA-223ENST00000515459 GABRG2P18507 467 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 TNNI1P19237 187 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 TNNC1P63316 161 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 RING1Q06587 406 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 WDR72Q3MJ13 1102 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 LRSAM1Q6UWE0 723 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 ETFBKMTQ8IXQ9 262 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 DEFB119Q8N690 84 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 FBXO32Q969P5 355 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 ZFRQ96KR1 1074 aaKnown RBP16.74■□□□□ 0.27
LMNA-223ENST00000515459 PANK2Q9BZ23 570 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 CAPN10Q9HC96 672 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 FSCN3Q9NQT6 498 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 DEC1Q9P2X7 70 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 LHX6Q9UPM6 363 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 PCDH15Q96QU1 1955 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 WDFY3Q8IZQ1 3526 aa16.74■□□□□ 0.27
LMNA-223ENST00000515459 A8MXQ7 604 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 ZBTB24O43167 697 aaPredicted RBP16.73■□□□□ 0.27
LMNA-223ENST00000515459 HOXC11O43248 304 aaPredicted RBP16.73■□□□□ 0.27
LMNA-223ENST00000515459 TULP3O75386 442 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 DLATP10515 647 aaKnown RBP16.73■□□□□ 0.27
LMNA-223ENST00000515459 HOXB2P14652 356 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 ZNF33AQ06730 810 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 ANO4Q32M45 955 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 C10orf76Q5T2E6 689 aa16.73■□□□□ 0.27
LMNA-223ENST00000515459 HECTD3Q5T447 861 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms