RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 SPATA4Q8NEY3 305 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 FBXO22Q8NEZ5 403 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 CLEC4CQ8WTT0 213 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 ALG3Q92685 438 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 SMARCAL1Q9NZC9 954 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 CEP104O60308 925 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 FGF18O76093 207 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 URODP06132 367 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 TKTL1P51854 596 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 ARPP19P56211 112 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 PIGHQ14442 188 aaPredicted RBP20.69■□□□□ 0.9
SSBP2-218ENST00000514493 DCAF12L1Q5VU92 463 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 EMC1Q8N766 993 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 SPPL2BQ8TCT7 592 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 C2orf15Q8WU43 125 aaKnown RBP20.69■□□□□ 0.9
SSBP2-218ENST00000514493 KRT35Q92764 455 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 PGLYRP2Q96PD5 576 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 C2CD4BA6NLJ0 364 aa20.68■□□□□ 0.9
SSBP2-218ENST00000514493 PGRMC1O00264 195 aaKnown RBP20.68■□□□□ 0.9
SSBP2-218ENST00000514493 PSMA2P25787 234 aa20.68■□□□□ 0.9
SSBP2-218ENST00000514493 ROR1Q01973 937 aa20.68■□□□□ 0.9
SSBP2-218ENST00000514493 ARCQ7LC44 396 aa20.68■□□□□ 0.9
SSBP2-218ENST00000514493 GPR65Q8IYL9 337 aa20.68■□□□□ 0.9
SSBP2-218ENST00000514493 GPR161Q8N6U8 529 aaKnown RBP20.68■□□□□ 0.9
SSBP2-218ENST00000514493 KHSRPQ92945 711 aaKnown RBP eCLIP20.68■□□□□ 0.96e-7■■■□□ 15.9
SSBP2-218ENST00000514493 RNPC3Q96LT9 517 aaKnown RBP20.68■□□□□ 0.9
SSBP2-218ENST00000514493 UBE2OQ9C0C9 1292 aaKnown RBP20.68■□□□□ 0.9
SSBP2-218ENST00000514493 CNGB3Q9NQW8 809 aa20.68■□□□□ 0.9
SSBP2-218ENST00000514493 PCDHA3Q9Y5H8 950 aa20.68■□□□□ 0.9
SSBP2-218ENST00000514493 C2CD2LO14523 706 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 DPYSL4O14531 572 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 TRIM66O15016 1216 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 FLT3P36888 993 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 GRIK1P39086 918 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 MARCKSL1P49006 195 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 PEX5P50542 639 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 MRPS5P82675 430 aaKnown RBP20.67■□□□□ 0.9
SSBP2-218ENST00000514493 KRT17Q04695 432 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 C2orf54Q08AI8 447 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 SHHQ15465 462 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 TAF5Q15542 800 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 TRNP1Q6NT89 227 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 RNF19BQ6ZMZ0 732 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 VPS52Q8N1B4 723 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 ATAD1Q8NBU5 361 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 ANKRD7Q92527 254 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 ULBP1Q9BZM6 244 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 PRO3102Q9H379 93 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 TTC7AQ9ULT0 858 aaPredicted RBP20.67■□□□□ 0.9
SSBP2-218ENST00000514493 WDR27A2RRH5 827 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 ADAM12O43184 909 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 SART1O43290 800 aaKnown RBP20.67■□□□□ 0.9
SSBP2-218ENST00000514493 HSF2BPO75031 334 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 GRAP2O75791 330 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 VNN2O95498 520 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 RPL17P18621 184 aaKnown RBP20.67■□□□□ 0.9
SSBP2-218ENST00000514493 GPD1P21695 349 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 NDUFV1P49821 464 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 ZNF143P52747 638 aaPredicted RBP20.67■□□□□ 0.9
SSBP2-218ENST00000514493 DAOAP59103 153 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 RNASE9P60153 205 aaKnown RBP20.67■□□□□ 0.9
SSBP2-218ENST00000514493 EFHC1Q5JVL4 640 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 TTC9BQ8N6N2 239 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 C8orf48Q96LL4 319 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 CLSTN3Q9BQT9 956 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 ZBP1Q9H171 429 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 ASNSD1Q9NWL6 643 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 RWDD3Q9Y3V2 267 aa20.67■□□□□ 0.9
SSBP2-218ENST00000514493 OR1D2P34982 312 aa20.66■□□□□ 0.9
SSBP2-218ENST00000514493 SLC5A3P53794 718 aa20.66■□□□□ 0.9
SSBP2-218ENST00000514493 CLUL1Q15846 466 aa20.66■□□□□ 0.9
SSBP2-218ENST00000514493 SCN4BQ8IWT1 228 aa20.66■□□□□ 0.9
SSBP2-218ENST00000514493 SCML4Q8N228 414 aa20.66■□□□□ 0.9
SSBP2-218ENST00000514493 MMGT1Q8N4V1 131 aa20.66■□□□□ 0.9
SSBP2-218ENST00000514493 KLHL23Q8NBE8 558 aa20.66■□□□□ 0.9
SSBP2-218ENST00000514493 RXFP2Q8WXD0 754 aa20.66■□□□□ 0.9
SSBP2-218ENST00000514493 COLQQ9Y215 455 aaPredicted RBP20.66■□□□□ 0.9
SSBP2-218ENST00000514493 LINC01553A4QN01 128 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 TNFRSF10BO14763 440 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 PSTPIP1O43586 416 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 DAB1O75553 588 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 ZBED1O96006 694 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 GLI1P08151 1106 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 CTNNB1P35222 781 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 RWDD2BP57060 319 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 ACAP1Q15027 740 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 DAB2IPQ5VWQ8 1189 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 CNPY3Q9BT09 278 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 USTQ9Y2C2 406 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 USP3Q9Y6I4 520 aa20.65■□□□□ 0.9
SSBP2-218ENST00000514493 PDGFRAP16234 1089 aa20.64■□□□□ 0.9
SSBP2-218ENST00000514493 BMPR1AP36894 532 aa20.64■□□□□ 0.9
SSBP2-218ENST00000514493 CREMQ03060 361 aa20.64■□□□□ 0.9
SSBP2-218ENST00000514493 BHLHA9Q7RTU4 235 aa20.64■□□□□ 0.9
SSBP2-218ENST00000514493 IRGQQ8WZA9 623 aa20.64■□□□□ 0.9
SSBP2-218ENST00000514493 FAM149B1Q96BN6 582 aa20.64■□□□□ 0.9
SSBP2-218ENST00000514493 NAP1L3Q99457 506 aaPredicted RBP20.64■□□□□ 0.9
SSBP2-218ENST00000514493 PLVAPQ9BX97 442 aa20.64■□□□□ 0.9
SSBP2-218ENST00000514493 CRISPLD1Q9H336 500 aa20.64■□□□□ 0.9
SSBP2-218ENST00000514493 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms