RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 DLGAP2Q9P1A6 1054 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 KIF17Q9P2E2 1029 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 CAPN11Q9UMQ6 739 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 WDR17Q8IZU2 1322 aa7.52□□□□□ -1.2
NIPBL-208ENST00000514335 RRN3P2A6NIE6 340 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 GPC4O75487 556 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 CCNDBP1O95273 360 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 KRT75O95678 551 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 LMNAP02545 664 aaKnown RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 NR3C2P08235 984 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ZBTB48P10074 688 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 HDCP19113 662 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 PTBP1P26599 531 aaKnown RBP eCLIP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 G0S2P27469 103 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 PDIA3P30101 505 aaKnown RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 CTNNB1P35222 781 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 GSSP48637 474 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 MAP3K12Q12852 859 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 TBX2Q13207 712 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 TARBP2Q15633 366 aaKnown RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 PXDC1Q5TGL8 231 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ZNF425Q6IV72 752 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 OGFOD3Q6PK18 319 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 TXNDC11Q6PKC3 985 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 LARP1Q6PKG0 1096 aaKnown RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 PAOXQ6QHF9 649 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 TRIM67Q6ZTA4 783 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 RAB11FIP2Q7L804 512 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ERO1BQ86YB8 467 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ZNF784Q8NCA9 323 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 CABLES1Q8TDN4 633 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ORAI2Q96SN7 254 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 RBM4BQ9BQ04 359 aaKnown RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 FAM83CQ9BQN1 747 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 RBM4Q9BWF3 364 aaKnown RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 TBC1D10AQ9BXI6 508 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 SLC26A6Q9BXS9 759 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ADAM19Q9H013 955 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 CCDC87Q9NVE4 849 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 DICER1Q9UPY3 1922 aaKnown RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 A0A088AWK7 358 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 GCOM1H8Y6P7 765 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 CLDN3O15551 220 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 SRGAP2O75044 1071 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 RBBP9O75884 186 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ENDOD1O94919 500 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 FAM13AO94988 1023 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 PLGP00747 810 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 SNRPA1P09661 255 aaKnown RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 CRKLP46109 303 aaKnown RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 DHPSP49366 369 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 MFAP3P55082 362 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 P2RX3P56373 397 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 PURAQ00577 322 aaKnown RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 RIPK1Q13546 671 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 NPTX1Q15818 432 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 PARP6Q2NL67 630 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ANKRD20A4Q4UJ75 823 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ANKRD20A1Q5TYW2 823 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ZSCAN25Q6NSZ9 544 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 SCYL2Q6P3W7 929 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 KRT73Q86Y46 540 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 THNSL2Q86YJ6 484 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 CRYBG2Q8N1P7 616 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 DEPDC4Q8N2C3 294 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 CPA6Q8N4T0 437 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 CAMKK1Q8N5S9 505 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 FSIP1Q8NA03 581 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 IFI44Q8TCB0 444 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ADAMTS18Q8TE60 1221 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 PPP1R13BQ96KQ4 1090 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 PINK1Q9BXM7 581 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ZNF518BQ9C0D4 1074 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 TM9SF3Q9HD45 589 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 ARMC1Q9NVT9 282 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 GID8Q9NWU2 228 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 SIRPGQ9P1W8 387 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 PARP3Q9Y6F1 533 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.52□□□□□ -1.21
NIPBL-208ENST00000514335 MROH5Q6ZUA9 1318 aa7.52□□□□□ -1.21
NIPBL-208ENST00000514335 GOLGA8QA0A0J9YX86 632 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 A6NL46 340 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 F8W8V4 182 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 TIMP2P16035 220 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 GARSP41250 739 aaKnown RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CACNB3P54284 484 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 S100A12P80511 92 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 EFR3AQ14156 821 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 ALX1Q15699 326 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 AANATQ16613 207 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 ZNF674Q2M3X9 581 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 DSG4Q86SJ6 1040 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 SGMS1Q86VZ5 419 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 PASD1Q8IV76 773 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 PM20D2Q8IYS1 436 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 LPCAT1Q8NF37 534 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 OR8K3Q8NH51 312 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 ZNF671Q8TAW3 534 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CCT6BQ92526 530 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms