RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 NFU1Q9UMS0 254 aa13.47□□□□□ -0.25
PVT1-203ENST00000513868 MKI67P46013 3256 aaKnown RBP13.46□□□□□ -0.25
PVT1-203ENST00000513868 hCG_1818297A0A087WSY0 165 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 LRRD1A4D1F6 860 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 FAM187AA6NFU0 413 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 AP1G2O75843 785 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 ENDOD1O94919 500 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 KDELR1P24390 212 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 PTPN9P43378 593 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 FNTAP49354 379 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 SLC8A3P57103 927 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 C1QTNF8P60827 252 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 MRPS5P82675 430 aaKnown RBP13.46□□□□□ -0.26
PVT1-203ENST00000513868 ATP11AP98196 1134 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 SMC1AQ14683 1233 aaKnown RBP13.46□□□□□ -0.26
PVT1-203ENST00000513868 MAP9Q49MG5 647 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 TFDP3Q5H9I0 405 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 DUPD1Q68J44 220 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 GPRIN1Q7Z2K8 1008 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 JAMLQ86YT9 394 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 EIF1ADQ8N9N8 165 aaKnown RBP13.46□□□□□ -0.26
PVT1-203ENST00000513868 ATG4AQ8WYN0 398 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 SLCO2A1Q92959 643 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 SMARCD1Q96GM5 515 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 DDX23Q9BUQ8 820 aaKnown RBP13.46□□□□□ -0.26
PVT1-203ENST00000513868 UBXN6Q9BZV1 441 aa13.46□□□□□ -0.26
PVT1-203ENST00000513868 PRG3Q9Y2Y8 225 aaPredicted RBP13.46□□□□□ -0.26
PVT1-203ENST00000513868 ARHGEF37A1IGU5 675 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 NRP1O14786 923 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 DAPK3O43293 454 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 OAZ2O95190 189 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 CD48P09326 243 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 FAM153BP0C7A2 387 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 SDC4P31431 198 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 ARSEP51690 589 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 HDAC4P56524 1084 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 YWHAHQ04917 246 aaPredicted RBP13.45□□□□□ -0.26
PVT1-203ENST00000513868 CASP8Q14790 479 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 CCNG2Q16589 344 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 CDO1Q16878 200 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 FAM153CQ494X1 144 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 EFHC1Q5JVL4 640 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 HDXQ7Z353 690 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 DEFB128Q7Z7B8 93 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 NPAS4Q8IUM7 802 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 ABI1Q8IZP0 508 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 THEM5Q8N1Q8 247 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 FAM172AQ8WUF8 416 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 IFT81Q8WYA0 676 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 GDAP1L1Q96MZ0 367 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 FAM193BQ96PV7 902 aaPredicted RBP13.45□□□□□ -0.26
PVT1-203ENST00000513868 ERP44Q9BS26 406 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 FAM153AQ9UHL3 310 aa13.45□□□□□ -0.26
PVT1-203ENST00000513868 CETN2P41208 172 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 TKTL1P51854 596 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 EPHB4P54760 987 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 SNX1Q13596 522 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 CUL1Q13616 776 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 LRRC26Q2I0M4 334 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 ZFYVE27Q5T4F4 411 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 KAZNQ674X7 775 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.44□□□□□ -0.26
PVT1-203ENST00000513868 ANKLE1Q8NAG6 615 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 CAVIN3Q969G5 261 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 PAWRQ96IZ0 340 aaKnown RBP13.44□□□□□ -0.26
PVT1-203ENST00000513868 NEUROG2Q9H2A3 272 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 LRRC4Q9HBW1 653 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 NGRNQ9NPE2 291 aaKnown RBP13.44□□□□□ -0.26
PVT1-203ENST00000513868 MARCH5Q9NX47 278 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 CALCOCO1Q9P1Z2 691 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 LRFN2Q9ULH4 789 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 EFR3BQ9Y2G0 817 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 ATP11BQ9Y2G3 1177 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 UTP11Q9Y3A2 253 aaKnown RBP13.44□□□□□ -0.26
PVT1-203ENST00000513868 PLXNA3P51805 1871 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 ALPK3Q96L96 1907 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 HSF2BPO75031 334 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 TADA2AO75478 443 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 TJP3O95049 919 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 FYNP06241 537 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 BDNFP23560 247 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 MATKP42679 507 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 SLC11A1P49279 550 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 DRG2P55039 364 aaKnown RBP13.44□□□□□ -0.26
PVT1-203ENST00000513868 DAOAP59103 153 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 YWHAZP63104 245 aaKnown RBP13.44□□□□□ -0.26
PVT1-203ENST00000513868 OTUD1Q5VV17 481 aaPredicted RBP13.44□□□□□ -0.26
PVT1-203ENST00000513868 EMBQ6PCB8 327 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 HFE2Q6ZVN8 426 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 BHLHA9Q7RTU4 235 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 BNIPLQ7Z465 357 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 CCDC105Q8IYK2 499 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 DEFB106AQ8N104 65 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 NT5C3BQ969T7 300 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 RUNDC3BQ96NL0 473 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 SLC2A13Q96QE2 648 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 FAM118BQ9BPY3 351 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 GPR62Q9BZJ7 368 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 ULBP1Q9BZM6 244 aa13.44□□□□□ -0.26
PVT1-203ENST00000513868 RAB17Q9H0T7 212 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms