RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CAMTA1Q9Y6Y1 1673 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 ZBTB39O15060 712 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 MED24O75448 989 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 CYP2B6P20813 491 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 STX5Q13190 355 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 FASTKD1Q53R41 847 aaKnown RBP11.65□□□□□ -0.54
TCOF1-211ENST00000513346 LMBRD2Q68DH5 695 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-211ENST00000513346 PRUNE1Q86TP1 453 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 PLD3Q8IV08 490 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 ATP6V1E2Q96A05 226 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 RIT2Q99578 217 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 MXRA8Q9BRK3 442 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 NRDE2Q9H7Z3 1164 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 DDTLA6NHG4 134 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-211ENST00000513346 M0QYV0 167 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 GJB6O95452 261 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 CAP2P40123 477 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 AP3M2P53677 418 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 RPS6P62753 249 aaKnown RBP11.65□□□□□ -0.54
TCOF1-211ENST00000513346 IL17AQ16552 155 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 PDPK2PQ6A1A2 396 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 ZBTB49Q6ZSB9 765 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 NANOGNBQ7Z5D8 188 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 STKLD1Q8NE28 680 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 URGCPQ8TCY9 931 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 APBB2Q92870 758 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 L3MBTL3Q96JM7 780 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-211ENST00000513346 CHST7Q9NS84 486 aa11.65□□□□□ -0.54
TCOF1-211ENST00000513346 DISP2A7MBM2 1401 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 MEI4A8MW99 385 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 ANGPT2O15123 496 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 MAFGO15525 162 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 IL1R1P14778 569 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 GRK2P25098 689 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 SERPINB5P36952 375 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 DEFA1P59665 94 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 DEFA3P59666 94 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 DAB2P98082 770 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 COBLL1Q53SF7 1204 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 FAM102AQ5T9C2 384 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 HGSNATQ68CP4 663 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 AAGABQ6PD74 315 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 OLFML1Q6UWY5 402 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 USP50Q70EL3 339 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 POU5F2Q8N7G0 328 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 ZNF555Q8NEP9 628 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 CHST13Q8NET6 341 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 FAXDC2Q96IV6 333 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 RUSC1Q9BVN2 902 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 MRPS26Q9BYN8 205 aaKnown RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 ILKAPQ9H0C8 392 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 AK5Q9Y6K8 562 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 IFT172Q9UG01 1749 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 UMODL1Q5DID0 1318 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 GH1P01241 217 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 ABHD2P08910 425 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 SPRP35270 261 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 SNRPFP62306 86 aaKnown RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 XIAPP98170 497 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 MXD4Q14582 209 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 SH3TC2Q8TF17 1288 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 ZFAND2BQ8WV99 257 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 RSAD1Q9HA92 442 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 PCDH9Q9HC56 1237 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 F5H423 210 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 BNIP3LO60238 219 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 ATP6V1G1O75348 118 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 LGR5O75473 907 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 VIL1P09327 827 aaKnown RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 RRM1P23921 792 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 CDK7P50613 346 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 YWHAHQ04917 246 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 TSTA3Q13630 321 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 OTOAQ7RTW8 1153 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 CLEC4FQ8N1N0 589 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 GPRC5AQ8NFJ5 357 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 TNIP2Q8NFZ5 429 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 ETNPPLQ8TBG4 499 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 LRRC19Q9H756 370 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 EML4Q9HC35 981 aaKnown RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 SORCS3Q9UPU3 1222 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 PIN4Q9Y237 131 aaKnown RBP11.64□□□□□ -0.55
TCOF1-211ENST00000513346 NCANO14594 1321 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 PAMP19021 973 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 SSTR1P30872 391 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 USP46P62068 366 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 TFDP3Q5H9I0 405 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 IRF2BP2Q7Z5L9 587 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 KYQ8NBH2 561 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 TMEM121Q9BTD3 319 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 DCDC2Q9UHG0 476 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 DAPK2Q9UIK4 370 aa11.64□□□□□ -0.55
TCOF1-211ENST00000513346 SPDYE2BA6NHP3 402 aa11.63□□□□□ -0.55
TCOF1-211ENST00000513346 BCL10O95999 233 aa11.63□□□□□ -0.55
TCOF1-211ENST00000513346 ALBP02768 609 aa11.63□□□□□ -0.55
TCOF1-211ENST00000513346 PROCP04070 461 aa11.63□□□□□ -0.55
TCOF1-211ENST00000513346 SPDYE6P0CI01 402 aa11.63□□□□□ -0.55
TCOF1-211ENST00000513346 UQCRBP14927 111 aa11.63□□□□□ -0.55
TCOF1-211ENST00000513346 S100A5P33763 92 aa11.63□□□□□ -0.55
TCOF1-211ENST00000513346 PPARGP37231 505 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms