RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 LY6KQ17RY6 165 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 UBA3Q8TBC4 463 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 A1CFQ9NQ94 594 aaKnown RBP11.23□□□□□ -0.61
CPNE4-209ENST00000512055 HPS4Q9NQG7 708 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 FAM49BQ9NUQ9 324 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 DDX18Q9NVP1 670 aaKnown RBP11.23□□□□□ -0.61
CPNE4-209ENST00000512055 ERAP1Q9NZ08 941 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 ABT1Q9ULW3 272 aaKnown RBP11.23□□□□□ -0.61
CPNE4-209ENST00000512055 ZNF142P52746 1687 aaPredicted RBP11.23□□□□□ -0.61
CPNE4-209ENST00000512055 C1orf232A0A0U1RR37 186 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 KPNA7A9QM74 516 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 MYO1GB0I1T2 1018 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 ATP9AO75110 1047 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 PRLP01236 227 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 PDGFRBP09619 1106 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 LCP1P13796 627 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 ARF4P18085 180 aaPredicted RBP11.23□□□□□ -0.61
CPNE4-209ENST00000512055 SOX11P35716 441 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 IRAK1P51617 712 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 PPP3CAQ08209 521 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 KPNB1Q14974 876 aaKnown RBP11.23□□□□□ -0.61
CPNE4-209ENST00000512055 KYNUQ16719 465 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 NUP93Q8N1F7 819 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 RAB21Q9UL25 225 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 GH1P01241 217 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 PDGFRAP16234 1089 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 COPS2P61201 443 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 C19orf18Q8NEA5 215 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 SEC16BQ96JE7 1060 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 THTPAQ9BU02 230 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 EURLQ9NYK6 297 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 HACD3Q9P035 362 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 STK39Q9UEW8 545 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 NAMPTP43490 491 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 SLC29A2Q14542 456 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 PGBD2Q6P3X8 592 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 ABI1Q8IZP0 508 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 ZCCHC7Q8N3Z6 543 aaKnown RBP11.23□□□□□ -0.61
CPNE4-209ENST00000512055 C17orf50Q8WW18 174 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 VPS39Q96JC1 886 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 CCDC28BQ9BUN5 200 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 DDX56Q9NY93 547 aaKnown RBP11.23□□□□□ -0.61
CPNE4-209ENST00000512055 HBP1O60381 514 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 GARTP22102 1010 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 COILP38432 576 aaPredicted RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 RCOR2Q8IZ40 523 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 TNIP2Q8NFZ5 429 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 SUN5Q8TC36 379 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 MAML3Q96JK9 1138 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 ZBTB45Q96K62 511 aaPredicted RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 TTC25Q96NG3 672 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 RBM15Q96T37 977 aaKnown RBP eCLIP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 C8orf4Q9NR00 106 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 R3HDM2Q9Y2K5 976 aaKnown RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 CALCAP01258 141 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 ITGB3P05106 788 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 PTPRAP18433 802 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 CCNCP24863 283 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 FLT3P36888 993 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 NLRP11P59045 1033 aaKnown RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 NSUN2Q08J23 767 aaKnown RBP eCLIP11.22□□□□□ -0.612e-8■■■□□ 17.2
CPNE4-209ENST00000512055 MAPK7Q13164 816 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 DDI1Q8WTU0 396 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 ARHGEF26Q96DR7 871 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 TMA16Q96EY4 203 aaKnown RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 OTUB1Q96FW1 271 aaPredicted RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 CCT8L2Q96SF2 557 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 CHMP1AQ9HD42 196 aaPredicted RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 CACNA2D2Q9NY47 1150 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 ROBO1Q9Y6N7 1651 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 MYH2Q9UKX2 1941 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 EIF3HO15372 352 aaKnown RBP eCLIP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 ENO3P13929 434 aaPredicted RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 SOX6P35712 828 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 MCCD1P59942 119 aaPredicted RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 ARPC4P59998 168 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 EIF3EP60228 445 aaKnown RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 NME3Q13232 169 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 IMPG1Q17R60 797 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 RWDD4Q6NW29 188 aaKnown RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 GPRC5AQ8NFJ5 357 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 FEZF2Q8TBJ5 459 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 CENPTQ96BT3 561 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 CCL15-CCL14A0A0B4J2E2 113 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 KRT38O76015 456 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 GUCA1CO95843 209 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 BTN3A2P78410 334 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 RBP5P82980 135 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 PWP1Q13610 501 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 BYSLQ13895 437 aaKnown RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 CCL15Q16663 113 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 AARS2Q5JTZ9 985 aaKnown RBP11.22□□□□□ -0.61
CPNE4-209ENST00000512055 IFNEQ86WN2 208 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 PPM1NQ8N819 430 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 ACTRT1Q8TDG2 376 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 SPATC1LQ9H0A9 340 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 TAS2R14Q9NYV8 317 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 VAV3Q9UKW4 847 aa11.22□□□□□ -0.61
CPNE4-209ENST00000512055 PHLPP1O60346 1717 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms