RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 TUBGCP4Q9UGJ1 667 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 TUBE1Q9UJT0 475 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 MRFAP1Q9Y605 127 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 V9GYQ6 96 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 A0A088AWK7 358 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 CBX4O00257 560 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 NFIBO00712 420 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 IFNA14P01570 189 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 WEE2P0C1S8 567 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 CYP2C8P10632 490 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 ITGAXP20702 1163 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 ZNF10P21506 573 aaPredicted RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 PRCPP42785 496 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 MARSP56192 900 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 BIKQ13323 160 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 XRCC4Q13426 336 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 GNA13Q14344 377 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 STAT4Q14765 748 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 TSC22D1Q15714 1073 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 FRMD5Q7Z6J6 570 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 ERO1BQ86YB8 467 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 FAM9CQ8IZT9 166 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 SLC30A5Q8TAD4 765 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 THAP11Q96EK4 314 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 CDK5RAP1Q96SZ6 601 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 ADGRE3Q9BY15 652 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 NEK6Q9HC98 313 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 DPP3Q9NY33 737 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.98□□□□□ -1.45
USP38-203ENST00000511739 PDS5AQ29RF7 1337 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 KIF13AQ9H1H9 1805 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 TEX33O43247 280 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 ITGB3P05106 788 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 MPOP05164 745 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 THP07101 528 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 GARTP22102 1010 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 ST13P50502 369 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 KDSRQ06136 332 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 CNGA3Q16281 694 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 SNRNP35Q16560 246 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 AMHR2Q16671 573 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 HASPINQ8TF76 798 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 ZNF669Q96BR6 464 aaPredicted RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 REXO5Q96IC2 774 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 THTPAQ9BU02 230 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 DDX47Q9H0S4 455 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 AASDHPPTQ9NRN7 309 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 PCMTD2Q9NV79 361 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 SCAF8Q9UPN6 1271 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 RUVBL2Q9Y230 463 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 SIK3Q9Y2K2 1263 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 TBC1D3BA6NDS4 549 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 CYB561D2O14569 222 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 KCNQ2O43526 872 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 CPSF4O95639 269 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 GNRH1P01148 92 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 RPN2P04844 631 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 UMPSP11172 480 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 CCDC130P13994 396 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 GRK4P32298 578 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 CLK3P49761 638 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 ATP12AP54707 1039 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 NFE2Q16621 373 aaPredicted RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 MDH1BQ5I0G3 518 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 C16orf89Q6UX73 402 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 BTN2A1Q7KYR7 527 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 TSC22D3Q99576 134 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 PRRG4Q9BZD6 226 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 GOLPH3Q9H4A6 298 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 RSAD1Q9HA92 442 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 IARS2Q9NSE4 1012 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 GPN3Q9UHW5 284 aaPredicted RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 MANSC4A6NHS7 340 aaPredicted RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 PDXKO00764 312 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 GAS2O43903 313 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 ENO1P06733 434 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 POU1F1P28069 291 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 GUCY1A3Q02108 690 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 LRRC14Q15048 493 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 ACOX1Q15067 660 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 PGS1Q32NB8 556 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 RETSATQ6NUM9 610 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 FBXO33Q7Z6M2 555 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 GUF1Q8N442 669 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 TFB1MQ8WVM0 346 aaKnown RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 USP7Q93009 1102 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 ATG4CQ96DT6 458 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 GGT7Q9UJ14 662 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 MKL2Q9ULH7 1088 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 HPS5Q9UPZ3 1129 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 CRYL1Q9Y2S2 319 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 NCF1BA6NI72 391 aaPredicted RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 NCF1CA8MVU1 366 aaPredicted RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 M0R3G1 203 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 STRNO43815 780 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 NCF1P14598 390 aaPredicted RBP5.97□□□□□ -1.45
USP38-203ENST00000511739 DSG3P32926 999 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 NUMBP49757 651 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 C21orf59P57076 290 aa5.97□□□□□ -1.45
USP38-203ENST00000511739 ZNF200P98182 395 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms