RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 BRWD1Q9NSI6 2320 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 MUC6Q6W4X9 2439 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 OR6C75A6NL08 312 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 PSTPIP1O43586 416 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 FBXO21O94952 628 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 GLI1P08151 1106 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 FGFR1P11362 822 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 CTNNA1P35221 906 aaKnown RBP9.58□□□□□ -0.88
NR1I3-228ENST00000511676 TSPY1Q01534 308 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 PPP2R5EQ16537 467 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 TCTN1Q2MV58 587 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 GOLGA7BQ2TAP0 167 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 CFAP221Q4G0U5 840 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 PAN2Q504Q3 1202 aaKnown RBP9.58□□□□□ -0.88
NR1I3-228ENST00000511676 PPP1R26Q5T8A7 1209 aaPredicted RBP9.58□□□□□ -0.88
NR1I3-228ENST00000511676 FAM171BQ6P995 826 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 POLNQ7Z5Q5 900 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 RBM23Q86U06 439 aaKnown RBP9.58□□□□□ -0.88
NR1I3-228ENST00000511676 TTC30AQ86WT1 665 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 XYLT1Q86Y38 959 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 PASD1Q8IV76 773 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 RASGEF1CQ8N431 466 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 COLGALT1Q8NBJ5 622 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 FEZF2Q8TBJ5 459 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 MYCBPAPQ8TBZ2 947 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 ACTRT1Q8TDG2 376 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 RUBCNQ92622 972 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 ATOH1Q92858 354 aaPredicted RBP9.58□□□□□ -0.88
NR1I3-228ENST00000511676 FUBP3Q96I24 572 aaKnown RBP eCLIP9.58□□□□□ -0.88
NR1I3-228ENST00000511676 CEP295NLQ96MC4 621 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 TCF25Q9BQ70 676 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 SYT15Q9BQS2 421 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 TRIM62Q9BVG3 475 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 DUSP16Q9BY84 665 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 ADAM7Q9H2U9 754 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 CSNK1G1Q9HCP0 422 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 ASNSD1Q9NWL6 643 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 DDX43Q9NXZ2 648 aaKnown RBP9.58□□□□□ -0.88
NR1I3-228ENST00000511676 ANAPC7Q9UJX3 599 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 ADAM28Q9UKQ2 775 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.58□□□□□ -0.88
NR1I3-228ENST00000511676 USP15Q9Y4E8 981 aaPredicted RBP9.58□□□□□ -0.88
NR1I3-228ENST00000511676 ALG6Q9Y672 507 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 SCN1AP35498 2009 aa9.58□□□□□ -0.88
NR1I3-228ENST00000511676 TRIP11Q15643 1979 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 TSC2P49815 1807 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 TDRD15B5MCY1 1934 aaKnown RBP9.57□□□□□ -0.88
NR1I3-228ENST00000511676 CTAGE15A4D2H0 777 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 DPYSL4O14531 572 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 GABBR2O75899 941 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 DDHD2O94830 711 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 FTCDO95954 541 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 ALDH2P05091 517 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 CFHP08603 1231 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 FAM200BP0CF97 657 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 CTAGE8P0CG41 777 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 KRT3P12035 628 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 NPR3P17342 541 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 AVPR2P30518 371 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 PAFAH1B1P43034 410 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 PSMC1P62191 440 aaKnown RBP9.57□□□□□ -0.88
NR1I3-228ENST00000511676 YWHAHQ04917 246 aaPredicted RBP9.57□□□□□ -0.88
NR1I3-228ENST00000511676 NFE2Q16621 373 aaPredicted RBP9.57□□□□□ -0.88
NR1I3-228ENST00000511676 INTS6LQ5JSJ4 861 aaKnown RBP9.57□□□□□ -0.88
NR1I3-228ENST00000511676 OVOS1Q6IE37 1185 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 ANKRD54Q6NXT1 300 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 KCNT2Q6UVM3 1135 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 C4orf50Q6ZRC1 276 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 SLC26A9Q7LBE3 791 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 OTOP3Q7RTS5 596 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 SPRED2Q7Z698 418 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 CTAGE6Q86UF2 777 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 OSTM1Q86WC4 334 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 ZNF280BQ86YH2 543 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 CREG2Q8IUH2 290 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 CTAGE4Q8IX94 777 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 DCP1BQ8IZD4 617 aaKnown RBP9.57□□□□□ -0.88
NR1I3-228ENST00000511676 FUKQ8N0W3 1084 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 MRPL43Q8N983 215 aaKnown RBP9.57□□□□□ -0.88
NR1I3-228ENST00000511676 C2orf15Q8WU43 125 aaKnown RBP9.57□□□□□ -0.88
NR1I3-228ENST00000511676 SUSD6Q92537 303 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 SMARCD1Q96GM5 515 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 CPXM1Q96SM3 734 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 PKMYT1Q99640 499 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 RTP3Q9BQQ7 232 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 SYNCQ9H7C4 482 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 NRDE2Q9H7Z3 1164 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 CYTH4Q9UIA0 394 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 NME7Q9Y5B8 376 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 PCDHA3Q9Y5H8 950 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 IRAK3Q9Y616 596 aa9.57□□□□□ -0.88
NR1I3-228ENST00000511676 COL4A4P53420 1690 aaPredicted RBP9.57□□□□□ -0.88
NR1I3-228ENST00000511676 H7C4K7 107 aa9.56□□□□□ -0.88
NR1I3-228ENST00000511676 PGRMC1O00264 195 aaKnown RBP9.56□□□□□ -0.88
NR1I3-228ENST00000511676 ENC1O14682 589 aa9.56□□□□□ -0.88
NR1I3-228ENST00000511676 NRP1O14786 923 aa9.56□□□□□ -0.88
NR1I3-228ENST00000511676 SPOPO43791 374 aa9.56□□□□□ -0.88
NR1I3-228ENST00000511676 TBX10O75333 385 aa9.56□□□□□ -0.88
NR1I3-228ENST00000511676 TADA2AO75478 443 aa9.56□□□□□ -0.88
NR1I3-228ENST00000511676 TADA3O75528 432 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms