RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 TTC16Q8NEE8 873 aa12.77□□□□□ -0.37
CHFR-208ENST00000511001 ATRIPQ8WXE1 791 aa12.77□□□□□ -0.37
CHFR-208ENST00000511001 OVCA2Q8WZ82 227 aa12.77□□□□□ -0.37
CHFR-208ENST00000511001 EZH1Q92800 747 aaPredicted RBP12.77□□□□□ -0.37
CHFR-208ENST00000511001 SMARCE1Q969G3 411 aa12.77□□□□□ -0.37
CHFR-208ENST00000511001 ZFRQ96KR1 1074 aaKnown RBP12.77□□□□□ -0.37
CHFR-208ENST00000511001 SLITRK1Q96PX8 696 aa12.77□□□□□ -0.37
CHFR-208ENST00000511001 HNRNPABQ99729 332 aaKnown RBP12.77□□□□□ -0.37
CHFR-208ENST00000511001 NIF3L1Q9GZT8 377 aa12.77□□□□□ -0.37
CHFR-208ENST00000511001 CHORDC1Q9UHD1 332 aaPredicted RBP12.77□□□□□ -0.37
CHFR-208ENST00000511001 SDK1Q7Z5N4 2213 aa12.77□□□□□ -0.37
CHFR-208ENST00000511001 TPRP12270 2363 aaKnown RBP12.77□□□□□ -0.37
CHFR-208ENST00000511001 MED19A0JLT2 244 aaPredicted RBP12.76□□□□□ -0.37
CHFR-208ENST00000511001 HHLA1C9JL84 531 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 GADD45BO75293 160 aaPredicted RBP12.76□□□□□ -0.37
CHFR-208ENST00000511001 CILPO75339 1184 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 SMC2O95347 1197 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 ABL1P00519 1130 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
CHFR-208ENST00000511001 ADORA2BP29275 332 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 MXI1P50539 228 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 CBWD6Q4V339 395 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 CBWD3Q5JTY5 395 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 CBWD5Q5RIA9 395 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 CLEC20AQ6ZU45 233 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 GPRIN1Q7Z2K8 1008 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 CPA6Q8N4T0 437 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 DCLK2Q8N568 766 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 KIAA1958Q8N8K9 716 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 PDZD8Q8NEN9 1154 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 ATP2A3Q93084 1043 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 NT5C1AQ9BXI3 368 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 IMPG2Q9BZV3 1241 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 EPC1Q9H2F5 836 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 COMMD8Q9NX08 183 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 SMPD4Q9NXE4 827 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 GMIPQ9P107 970 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 MAN1B1Q9UKM7 699 aa12.76□□□□□ -0.37
CHFR-208ENST00000511001 CHURC1-FNTBB4DL54 471 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 SPTBN2O15020 2390 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 SLC16A3O15427 465 aaKnown RBP12.75□□□□□ -0.37
CHFR-208ENST00000511001 COCHO43405 550 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 MBL2P11226 248 aaPredicted RBP12.75□□□□□ -0.37
CHFR-208ENST00000511001 CD58P19256 250 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 BMP6P22004 513 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 OPRD1P41143 372 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 FNTBP49356 437 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 NRLP54845 237 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 MAP3K7CLP57077 242 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 FKBP3Q00688 224 aaKnown RBP12.75□□□□□ -0.37
CHFR-208ENST00000511001 GRSF1Q12849 480 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHFR-208ENST00000511001 PPP2R5DQ14738 602 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 ISM2Q6H9L7 571 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 FBXL13Q8NEE6 735 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 RUBCNQ92622 972 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 CD101Q93033 1021 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 TATDN2Q93075 761 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 WBP2Q969T9 261 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 RMDN1Q96DB5 314 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 CYFIP2Q96F07 1278 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 FAXDC2Q96IV6 333 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 TSG101Q99816 390 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 P2RY13Q9BPV8 354 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 CCSER2Q9H7U1 834 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 RAB20Q9NX57 234 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 SMG5Q9UPR3 1016 aaKnown RBP12.75□□□□□ -0.37
CHFR-208ENST00000511001 COQ4Q9Y3A0 265 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 FRYLO94915 3013 aa12.75□□□□□ -0.37
CHFR-208ENST00000511001 ANTXRLA6NF34 631 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 SCAMP3O14828 347 aaKnown RBP12.74□□□□□ -0.37
CHFR-208ENST00000511001 HRO43593 1189 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 RNF40O75150 1001 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 NFATC1O95644 943 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 CYP17A1P05093 508 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 FAM200BP0CF97 657 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 DRD1P21728 446 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 HOXA6P31267 233 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 TUBP50607 506 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 AMPD2Q01433 879 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 LRRC63Q05C16 580 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 HECTD3Q5T447 861 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 PPP1R26Q5T8A7 1209 aaPredicted RBP12.74□□□□□ -0.37
CHFR-208ENST00000511001 FILIP1Q7Z7B0 1213 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 SLC4A11Q8NBS3 891 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 IPO9Q96P70 1041 aaKnown RBP12.74□□□□□ -0.37
CHFR-208ENST00000511001 ARID3AQ99856 593 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 DUSP9Q99956 384 aaKnown RBP12.74□□□□□ -0.37
CHFR-208ENST00000511001 POLR3BQ9NW08 1133 aaPredicted RBP12.74□□□□□ -0.37
CHFR-208ENST00000511001 CFAP97Q9P2B7 532 aa12.74□□□□□ -0.37
CHFR-208ENST00000511001 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
CHFR-208ENST00000511001 PPP1R3GB7ZBB8 358 aa12.73□□□□□ -0.37
CHFR-208ENST00000511001 STX10O60499 249 aa12.73□□□□□ -0.37
CHFR-208ENST00000511001 RAD23BP54727 409 aa12.73□□□□□ -0.37
CHFR-208ENST00000511001 NR1H3Q13133 447 aa12.73□□□□□ -0.37
CHFR-208ENST00000511001 SRSF5Q13243 272 aaKnown RBP12.73□□□□□ -0.37
CHFR-208ENST00000511001 DHCR24Q15392 516 aa12.73□□□□□ -0.37
CHFR-208ENST00000511001 ZNF394Q53GI3 561 aa12.73□□□□□ -0.37
CHFR-208ENST00000511001 DCAF17Q5H9S7 520 aaPredicted RBP12.73□□□□□ -0.37
CHFR-208ENST00000511001 TCERG1LQ5VWI1 586 aa12.73□□□□□ -0.37
CHFR-208ENST00000511001 TTI2Q6NXR4 508 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms