RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 PRPF6O94906 941 aaKnown RBP17.04■□□□□ 0.32
CXCL1-202ENST00000509101 CD2BP2O95400 341 aaKnown RBP17.04■□□□□ 0.32
CXCL1-202ENST00000509101 DPP6P42658 865 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 PPP3CCP48454 512 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 CACNA2D1P54289 1103 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 NOP14P78316 857 aaKnown RBP17.04■□□□□ 0.32
CXCL1-202ENST00000509101 RPL6Q02878 288 aaKnown RBP17.04■□□□□ 0.32
CXCL1-202ENST00000509101 ALCAMQ13740 583 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 BYSLQ13895 437 aaKnown RBP17.04■□□□□ 0.32
CXCL1-202ENST00000509101 SPDYCQ5MJ68 293 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 LY6G5CQ5SRR4 150 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 RRAGBQ5VZM2 374 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 LARP1BQ659C4 914 aaKnown RBP17.04■□□□□ 0.32
CXCL1-202ENST00000509101 SV2BQ7L1I2 683 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 HS2ST1Q7LGA3 356 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 DDX42Q86XP3 938 aaKnown RBP eCLIP17.04■□□□□ 0.32
CXCL1-202ENST00000509101 DEFB119Q8N690 84 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 KIAA1958Q8N8K9 716 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 C8orf48Q96LL4 319 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 SLITRK1Q96PX8 696 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 MRPL45Q9BRJ2 306 aaKnown RBP17.04■□□□□ 0.32
CXCL1-202ENST00000509101 TMEM30AQ9NV96 361 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 NME7Q9Y5B8 376 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 ADAMTS20P59510 1910 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 AP5Z1O43299 807 aa17.03■□□□□ 0.32
CXCL1-202ENST00000509101 HOXD12P35452 270 aa17.03■□□□□ 0.32
CXCL1-202ENST00000509101 TNFRSF4P43489 277 aa17.03■□□□□ 0.32
CXCL1-202ENST00000509101 DUOXA1Q1HG43 343 aa17.03■□□□□ 0.32
CXCL1-202ENST00000509101 TDRD10Q5VZ19 366 aaKnown RBP17.03■□□□□ 0.32
CXCL1-202ENST00000509101 LRSAM1Q6UWE0 723 aa17.03■□□□□ 0.32
CXCL1-202ENST00000509101 CBWD2Q8IUF1 395 aa17.03■□□□□ 0.32
CXCL1-202ENST00000509101 PHTF2Q8N3S3 785 aa17.03■□□□□ 0.32
CXCL1-202ENST00000509101 ZNF513Q8N8E2 541 aaPredicted RBP17.03■□□□□ 0.32
CXCL1-202ENST00000509101 OR2I1PQ8NGU4 316 aa17.03■□□□□ 0.32
CXCL1-202ENST00000509101 SNX25Q9H3E2 840 aa17.03■□□□□ 0.32
CXCL1-202ENST00000509101 CALCOCO1Q9P1Z2 691 aa17.03■□□□□ 0.32
CXCL1-202ENST00000509101 SLC6A14Q9UN76 642 aa17.03■□□□□ 0.32
CXCL1-202ENST00000509101 A0A0A0MRY4 1105 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 UPK3BL1B0FP48 263 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 UPK3BL2E5RIL1 263 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 OPHN1O60890 802 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 GABRG2P18507 467 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 TXLNAP40222 546 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 FAM193AP78312 1265 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 GAD2Q05329 585 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 GFPT1Q06210 699 aaPredicted RBP17.02■□□□□ 0.32
CXCL1-202ENST00000509101 DUOXA2Q1HG44 320 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 CHCHD4Q8N4Q1 142 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 MINDY1Q8N5J2 469 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 NAT16Q8N8M0 369 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 OR6B3Q8NGW1 331 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 CEP76Q8TAP6 659 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 CLIC6Q96NY7 704 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 ZNF518BQ9C0D4 1074 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 DPEP3Q9H4B8 488 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 TBC1D14Q9P2M4 693 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 FBXO2Q9UK22 296 aaPredicted RBP17.02■□□□□ 0.32
CXCL1-202ENST00000509101 CLIC4Q9Y696 253 aa17.02■□□□□ 0.32
CXCL1-202ENST00000509101 FRMD3A2A2Y4 597 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 TBC1D3BA6NDS4 549 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 ZNF233A6NK53 670 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 CLDN5O00501 218 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 SERPINF2P08697 491 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 HOXB2P14652 356 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 WASP42768 502 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 C10orf76Q5T2E6 689 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 BTBD8Q5XKL5 378 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 SLC36A4Q6YBV0 504 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 TRMT11Q7Z4G4 463 aaKnown RBP17.01■□□□□ 0.31
CXCL1-202ENST00000509101 WDR49Q8IV35 697 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 ETFBKMTQ8IXQ9 262 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 FBXO32Q969P5 355 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 ERLEC1Q96DZ1 483 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 ZFRQ96KR1 1074 aaKnown RBP17.01■□□□□ 0.31
CXCL1-202ENST00000509101 ELOVL4Q9GZR5 314 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 CAPN10Q9HC96 672 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 PANK4Q9NVE7 773 aa17.01■□□□□ 0.31
CXCL1-202ENST00000509101 E2F8A0AVK6 867 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 VPS37CA5D8V6 355 aaPredicted RBP17■□□□□ 0.31
CXCL1-202ENST00000509101 H0Y626 953 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 KIAA0391O15091 583 aaKnown RBP17■□□□□ 0.31
CXCL1-202ENST00000509101 COCHO43405 550 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 TULP3O75386 442 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 TRIM16O95361 564 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 PTPN1P18031 435 aaKnown RBP17■□□□□ 0.31
CXCL1-202ENST00000509101 YWHAQP27348 245 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 RDXP35241 583 aaKnown RBP17■□□□□ 0.31
CXCL1-202ENST00000509101 GNL1P36915 607 aaPredicted RBP17■□□□□ 0.31
CXCL1-202ENST00000509101 STAT6P42226 847 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 ZNF33AQ06730 810 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 SURF1Q15526 300 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 C8orf34Q49A92 452 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 TRAPPC11Q7Z392 1133 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 BBS7Q8IWZ6 715 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 TERB1Q8NA31 727 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 GLIS3Q8NEA6 775 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 PDZD8Q8NEN9 1154 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 OTUB2Q96DC9 234 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 HSPBP1Q9NZL4 362 aa17■□□□□ 0.31
CXCL1-202ENST00000509101 SH3BP1Q9Y3L3 701 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms