RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 SLC22A25Q6T423 547 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 PCSK4Q6UW60 755 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 BTNL9Q6UXG8 535 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 FRMD7Q6ZUT3 714 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 RAB11FIP4Q86YS3 637 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 TBC1D21Q8IYX1 336 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 ATP11CQ8NB49 1132 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 KCTD6Q8NC69 237 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 IPMKQ8NFU5 416 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 MOSPD2Q8NHP6 518 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 IL31RAQ8NI17 732 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 CALML6Q8TD86 181 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 OTUD7AQ8TE49 926 aaPredicted RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 MIEF2Q96C03 454 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 KIF1BPQ96EK5 621 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 SENP6Q9GZR1 1112 aaPredicted RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 EPS8L2Q9H6S3 715 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 ARMT1Q9H993 441 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 ZNF287Q9HBT7 754 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 KCNH7Q9NS40 1196 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 TOMM22Q9NS69 142 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 IGSF9Q9P2J2 1179 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 MYO1AQ9UBC5 1043 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 RASAL2Q9UJF2 1139 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 EDARQ9UNE0 448 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 RBM8AQ9Y5S9 174 aaKnown RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 TNFRSF18Q9Y5U5 241 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 EPN1Q9Y6I3 576 aaPredicted RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 LMTK3Q96Q04 1460 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 LRRC14BA6NHZ5 514 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 NT5C1B-RDH14C9J2C7 533 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 H7C1D1 291 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 MYO1FO00160 1098 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 CAPN9O14815 690 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 SPTLC2O15270 562 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 KIF5CO60282 957 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 TSPAN3O60637 253 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 FAM20BO75063 409 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 BEST1O76090 585 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 PCP11498 1178 aaKnown RBP4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 SFTPCP11686 197 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 KRT13P13646 458 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 FGFR2P21802 821 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 ANP32AP39687 249 aaKnown RBP4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 MSH2P43246 934 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 CCR9P51686 369 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 PPP5CP53041 499 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 IRX3P78415 501 aaPredicted RBP4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 AKAP17AQ02040 695 aaKnown RBP4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 CREB5Q02930 508 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 UBE3AQ05086 875 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 CALD1Q05682 793 aaKnown RBP4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 CHRNDQ07001 517 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 COX10Q12887 443 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 SF3B3Q15393 1217 aaKnown RBP4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 FLYWCH1Q4VC44 716 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 MUM1L1Q5H9M0 696 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 KLHDC10Q6PID8 442 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 FAM111BQ6SJ93 734 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 TMTC3Q6ZXV5 915 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 GAREM2Q75VX8 874 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 OTUD6AQ7L8S5 288 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 ZER1Q7Z7L7 766 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 PRPF39Q86UA1 669 aaKnown RBP4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 UNC45BQ8IWX7 931 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 CCAR2Q8N163 923 aaKnown RBP4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 BICD2Q8TD16 824 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 KCNG4Q8TDN1 519 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 RUBCNQ92622 972 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 HAS1Q92839 578 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 EAF2Q96CJ1 260 aaPredicted RBP4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 TEX13BQ9BXU2 312 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 SLC6A15Q9H2J7 730 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 RMI1Q9H9A7 625 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 MLXIPQ9HAP2 919 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 LAMP5Q9UJQ1 280 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 OGDHLQ9ULD0 1010 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 DUSP12Q9UNI6 340 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 ASB1Q9Y576 335 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 XDHP47989 1333 aa4.69□□□□□ -1.66
SMARCA5-202ENST00000508573 SYNJ2BP-COX16A0A087WUM0 186 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 A0A1W2PPL8 197 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 UBE2QL1A1L167 161 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 C2orf78A6NCI8 922 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 AGAP14A8MT82 685 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 FAM25EA8MYX2 175 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 AP3D1O14617 1153 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 NDC80O14777 642 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 FYB1O15117 783 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 PHGDHO43175 533 aaKnown RBP4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 FMO6PO60774 539 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 SOCS5O75159 536 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 BBOX1O75936 387 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 ATP5BP06576 529 aaKnown RBP4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 CSF1P09603 554 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 HNRNPA1P09651 372 aaKnown RBP eCLIP4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 PTX3P26022 381 aaPredicted RBP4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 ADSLP30566 484 aaPredicted RBP4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 DPP6P42658 865 aa4.68□□□□□ -1.66
SMARCA5-202ENST00000508573 IL12RB1P42701 662 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms