RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 MYD88Q99836 296 aa6.12□□□□□ -1.43
GYPA-205ENST00000508337 ALG13Q9NP73 1137 aaKnown RBP6.12□□□□□ -1.43
GYPA-205ENST00000508337 DNAJB11Q9UBS4 358 aa6.12□□□□□ -1.43
GYPA-205ENST00000508337 AP4M1O00189 453 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 CCNT2O60583 730 aaKnown RBP6.11□□□□□ -1.43
GYPA-205ENST00000508337 IGLV2-14P01704 120 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 UQCRC1P31930 480 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 CLK3P49761 638 aaKnown RBP6.11□□□□□ -1.43
GYPA-205ENST00000508337 GATMP50440 423 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 CASP5P51878 434 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 E2F1Q01094 437 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 KCNAB1Q14722 419 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 DAZAP1Q96EP5 407 aaKnown RBP6.11□□□□□ -1.43
GYPA-205ENST00000508337 ZC3H10Q96K80 434 aaKnown RBP6.11□□□□□ -1.43
GYPA-205ENST00000508337 TIMP4Q99727 224 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 SLC25A32Q9H2D1 315 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 CERS4Q9HA82 394 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 SEMA4GQ9NTN9 838 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 DLL3Q9NYJ7 618 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 HPSEQ9Y251 543 aa6.11□□□□□ -1.43
GYPA-205ENST00000508337 SMIM22K7EJ46 135 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 EXOC3O60645 756 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 JTBO76095 146 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 SLC5A1P13866 664 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 TSHRP16473 764 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 BTF3P20290 206 aaKnown RBP6.1□□□□□ -1.43
GYPA-205ENST00000508337 FGFR2P21802 821 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 TNFSF4P23510 183 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 RBL1P28749 1068 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 CD38P28907 300 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 GPS1Q13098 491 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 CERKLQ49MI3 558 aaPredicted RBP6.1□□□□□ -1.43
GYPA-205ENST00000508337 MTHFD1LQ6UB35 978 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 DPP9Q86TI2 863 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 P3H2Q8IVL5 708 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 VPS50Q96JG6 964 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 ZBTB45Q96K62 511 aaPredicted RBP6.1□□□□□ -1.43
GYPA-205ENST00000508337 CCDC138Q96M89 665 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 FSD1LQ9BXM9 530 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 EIF2AQ9BY44 585 aaKnown RBP6.1□□□□□ -1.43
GYPA-205ENST00000508337 TRIM5Q9C035 493 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 STEAP1Q9UHE8 339 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 AMFRQ9UKV5 643 aa6.1□□□□□ -1.43
GYPA-205ENST00000508337 RASA4BC9J798 803 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 EXOC5O00471 708 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 RASA4O43374 803 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 COQ9O75208 318 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 ERBB2P04626 1255 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 ELFN1P0C7U0 828 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 JUPP14923 745 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 CREB1P16220 341 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 WT1P19544 449 aaPredicted RBP6.09□□□□□ -1.43
GYPA-205ENST00000508337 PCSK6P29122 969 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 CTGFP29279 349 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 GKP32189 559 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 ST3GAL2Q16842 350 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 TMEM119Q4V9L6 283 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 FAXCQ5TGI0 409 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 FCRL6Q6DN72 434 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 CLEC9AQ6UXN8 241 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 TRIM72Q6ZMU5 477 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 ZNF566Q969W8 418 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 RSPRY1Q96DX4 576 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 RIPOR3Q96MK2 946 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 HS6ST2Q96MM7 605 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 R3HDMLQ9H3Y0 253 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 TMOD4Q9NZQ9 345 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 ARPP21Q9UBL0 812 aaPredicted RBP6.09□□□□□ -1.43
GYPA-205ENST00000508337 NKX1-2Q9UD57 310 aaPredicted RBP6.09□□□□□ -1.43
GYPA-205ENST00000508337 PHTF1Q9UMS5 762 aa6.09□□□□□ -1.43
GYPA-205ENST00000508337 M0R3H8 397 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 GCATO75600 419 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 PDE8BO95263 885 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 PMS2P11Q13670 270 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 ARL13BQ3SXY8 428 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 FAM209BQ5JX69 171 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 USP17L6PQ6QN14 398 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 PTF1AQ7RTS3 328 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 SRLQ86TD4 932 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 OR2C3Q8N628 320 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 C11orf44Q8N8P7 122 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 GRAMD1AQ96CP6 724 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 PRR25Q96S07 402 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 NAA15Q9BXJ9 866 aaKnown RBP6.08□□□□□ -1.44
GYPA-205ENST00000508337 CIPCQ9C0C6 399 aa6.08□□□□□ -1.44
GYPA-205ENST00000508337 CLCA1A8K7I4 914 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 TARM1B6A8C7 271 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 UBE2Q2LH0YL09 131 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 TMPRSS11DO60235 418 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 PROP1O75360 226 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 PMPCBO75439 489 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 HARSP12081 509 aaKnown RBP6.07□□□□□ -1.44
GYPA-205ENST00000508337 MYCLP12524 364 aaPredicted RBP6.07□□□□□ -1.44
GYPA-205ENST00000508337 NTSR1P30989 418 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 ATICP31939 592 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 TIRAPP58753 221 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 NPY5RQ15761 445 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 ZNF362Q5T0B9 420 aaPredicted RBP6.07□□□□□ -1.44
GYPA-205ENST00000508337 FCRLBQ6BAA4 426 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 DPY19L2P1Q6NXN4 242 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms