RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 XPO1O14980 1071 aaKnown RBP9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 TRIM66O15016 1216 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 MOSPD3O75425 235 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 GRAP2O75791 330 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 ERBB2P04626 1255 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 SERPING1P05155 500 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 TPM1P09493 284 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 FAM228BP0C875 321 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 GABRR2P28476 465 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 PRKCIP41743 596 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 KCNQ1P51787 676 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 TKTL1P51854 596 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 KIF11P52732 1056 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 NOMO3P69849 1222 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 PDCLQ13371 301 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 TRIM14Q14142 442 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 MTF1Q14872 753 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 CLEC16AQ2KHT3 1053 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 HFE2Q6ZVN8 426 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 GAREM2Q75VX8 874 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 TMC8Q8IU68 726 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 SHKBP1Q8TBC3 707 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 PSMG2Q969U7 264 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 ZSWIM3Q96MP5 696 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 DNAI2Q9GZS0 605 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 POMKQ9H5K3 350 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 LRRC4Q9HBW1 653 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 SPTLC3Q9NUV7 552 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 DZANK1Q9NVP4 752 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 OSER1Q9NX31 292 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 ZDHHC7Q9NXF8 308 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 ADAMTS1Q9UHI8 967 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 CD207Q9UJ71 328 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 PCDHGC3Q9UN70 934 aa9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 USP15Q9Y4E8 981 aaPredicted RBP9.31□□□□□ -0.92
SCAMP1-202ENST00000506858 A0A1W2PQH9 124 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 GOLGA8SH3BPF8 625 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 MDM4O15151 490 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 PAPSS1O43252 624 aaPredicted RBP9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 XYLBO75191 536 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 TADA3O75528 432 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 TBX18O95935 607 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 F11P03951 625 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 CYP1A1P04798 512 aaPredicted RBP9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 HNRNPA1P09651 372 aaKnown RBP eCLIP9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 CEBPBP17676 345 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 PTPN2P17706 415 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 YWHAQP27348 245 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 PLA2G4AP47712 749 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 GFPT1Q06210 699 aaPredicted RBP9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 VEPH1Q14D04 833 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 STILQ15468 1287 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 TEAD2Q15562 447 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 PABPC1LQ4VXU2 614 aaKnown RBP9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 TXNDC8Q6A555 127 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 MMS22LQ6ZRQ5 1243 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 GET4Q7L5D6 327 aaPredicted RBP9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 BHLHA9Q7RTU4 235 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 SCD5Q86SK9 330 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 ELMOD1Q8N336 334 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 TMEM35BQ8NCS4 154 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 TTC16Q8NEE8 873 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 HDAC7Q8WUI4 952 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 SYN2Q92777 582 aaPredicted RBP9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 FBXO32Q969P5 355 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 MCRS1Q96EZ8 462 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 PPP1R13BQ96KQ4 1090 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 SPATA17Q96L03 361 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 ZNF830Q96NB3 372 aaPredicted RBP9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 SLC22A12Q96S37 553 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 CYP2S1Q96SQ9 504 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 C11orf70Q9BRQ4 267 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 SLC4A5Q9BY07 1137 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 SMG9Q9H0W8 520 aaKnown RBP9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 LHX5Q9H2C1 402 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 ATXN3LQ9H3M9 355 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 TFR2Q9UP52 801 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 MRPS23Q9Y3D9 190 aaKnown RBP9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 DAAM1Q9Y4D1 1078 aa9.3□□□□□ -0.92
SCAMP1-202ENST00000506858 TRIOO75962 3097 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 C2orf78A6NCI8 922 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 SOWAHDA6NJG2 315 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 YJEFN3A6XGL0 299 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 E7ENQ6 273 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 SCAMP3O14828 347 aaKnown RBP9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 MBTPS2O43462 519 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 NCK2O43639 380 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 SETSIPP0DME0 302 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 CSH1P0DML2 217 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 CSH2P0DML3 217 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 SRGAP2BP0DMP2 458 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 UNGP13051 313 aaPredicted RBP9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 IL9P15248 144 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 HOXB8P17481 243 aaPredicted RBP9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 HNRNPH3P31942 346 aaKnown RBP9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 SLC8A3P57103 927 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 RNASE9P60153 205 aaKnown RBP9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 TSR1Q2NL82 804 aaKnown RBP9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 RAB41Q5JT25 222 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms