RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 JAKMIP2Q96AA8 810 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 MYRFLQ96LU7 910 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 SMOQ99835 787 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 CRACR2AQ9BSW2 395 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 INTS2Q9H0H0 1204 aaKnown RBP13.88□□□□□ -0.19
TCOF1-209ENST00000506630 FAM124BQ9H5Z6 455 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-209ENST00000506630 TRPV4Q9HBA0 871 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 PRMT8Q9NR22 394 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-209ENST00000506630 HEBP1Q9NRV9 189 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 NFE2L3Q9Y4A8 694 aa13.88□□□□□ -0.19
TCOF1-209ENST00000506630 HEPACAM2A8MVW5 462 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 KCNJ18B7U540 433 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 PES1O00541 588 aaKnown RBP13.87□□□□□ -0.19
TCOF1-209ENST00000506630 BEST1O76090 585 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 RTN3O95197 1032 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-209ENST00000506630 PRAMEF12O95522 483 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 ADRB1P08588 477 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 TGM1P22735 817 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 AVPR1AP37288 418 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 SLC5A3P53794 718 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 RAD23BP54727 409 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 TYRO3Q06418 890 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 MTAPQ13126 283 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 KCNJ12Q14500 433 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 VITQ6UXI7 678 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 GBP6Q6ZN66 633 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 CLEC20AQ6ZU45 233 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 RRAGAQ7L523 313 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 ARID3BQ8IVW6 561 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-209ENST00000506630 CELF5Q8N6W0 485 aaKnown RBP13.87□□□□□ -0.19
TCOF1-209ENST00000506630 ZMIZ2Q8NF64 920 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 DEPDC1BQ8WUY9 529 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 DNASE1L2Q92874 299 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 RSPRY1Q96DX4 576 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 SLITRK1Q96PX8 696 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 HNRNPABQ99729 332 aaKnown RBP13.87□□□□□ -0.19
TCOF1-209ENST00000506630 TUBGCP2Q9BSJ2 902 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 TTLL2Q9BWV7 592 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 SLC46A2Q9BY10 475 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 SMG9Q9H0W8 520 aaKnown RBP13.87□□□□□ -0.19
TCOF1-209ENST00000506630 SAMSN1Q9NSI8 373 aaKnown RBP13.87□□□□□ -0.19
TCOF1-209ENST00000506630 ZMYM5Q9UJ78 669 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 PCDHB4Q9Y5E5 795 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 MYOFQ9NZM1 2061 aa13.87□□□□□ -0.19
TCOF1-209ENST00000506630 ACACBO00763 2458 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 ABL1P00519 1130 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 CD19P15391 556 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 PSMC3P17980 439 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 YWHAQP27348 245 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 SPEM2Q0P670 501 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 TAF10Q12962 218 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 LAIR1Q6GTX8 287 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 TMEM270Q6UE05 265 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 MON1AQ86VX9 555 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 YAF2Q8IY57 180 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 CMTM8Q8IZV2 173 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 UBR7Q8N806 425 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 ENOX1Q8TC92 643 aaKnown RBP13.86□□□□□ -0.19
TCOF1-209ENST00000506630 NETO1Q8TDF5 533 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 FBXO32Q969P5 355 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 E2F7Q96AV8 911 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 IER2Q9BTL4 223 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 BRD9Q9H8M2 597 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 PARD6AQ9NPB6 346 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 TRPM5Q9NZQ8 1165 aa13.86□□□□□ -0.19
TCOF1-209ENST00000506630 NDRG2Q9UN36 371 aaKnown RBP13.86□□□□□ -0.19
TCOF1-209ENST00000506630 TRAV19A0A0A6YYK7 116 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 GTPBP10A4D1E9 387 aaKnown RBP13.85□□□□□ -0.19
TCOF1-209ENST00000506630 LRP3O75074 770 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 CKMP06732 381 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 SLC9A1P19634 815 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 PTMSP20962 102 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 EEF1GP26641 437 aaKnown RBP13.85□□□□□ -0.19
TCOF1-209ENST00000506630 GDI1P31150 447 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 GCNT1Q02742 428 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 FZD5Q13467 585 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 LPAL2Q16609 132 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 EXOC3L4Q17RC7 722 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 GOLGA7BQ2TAP0 167 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 VWA3BQ502W6 1294 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 SGO2Q562F6 1265 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 TCP11X2Q5H9J9 407 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 ARHGAP17Q68EM7 881 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 TRIM65Q6PJ69 517 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 MAMSTRQ6ZN01 415 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 MFSD6LQ8IWD5 586 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 SCAMP5Q8TAC9 235 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 IRF7Q92985 503 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 LRRC3BQ96PB8 259 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 TRMT61BQ9BVS5 477 aaKnown RBP13.85□□□□□ -0.19
TCOF1-209ENST00000506630 CHRDQ9H2X0 955 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 CSNK1G1Q9HCP0 422 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 SPTBN2O15020 2390 aa13.85□□□□□ -0.19
TCOF1-209ENST00000506630 C2orf78A6NCI8 922 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 SOBPA7XYQ1 873 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 TNFRSF10BO14763 440 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 SLC30A4O14863 429 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 ZNF263O14978 683 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 RETP07949 1114 aa13.84□□□□□ -0.19
TCOF1-209ENST00000506630 USP17L7P0C7H9 530 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms