RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TTC39CQ8N584 583 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 ALLCQ8N6M5 410 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 SLC35B2Q8TB61 432 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 RUNDC3BQ96NL0 473 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 KCNK16Q96T55 309 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 DDX43Q9NXZ2 648 aaKnown RBP12.77□□□□□ -0.37
LIN54-206ENST00000506560 ANAPC5Q9UJX4 755 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 SGK1O00141 431 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 MYZAPP0CAP1 466 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 PTPN1P18031 435 aaKnown RBP12.76□□□□□ -0.37
LIN54-206ENST00000506560 PNPLA4P41247 253 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 BCAT1P54687 386 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 NKX3-2P78367 333 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 IFFO1Q0D2I5 559 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 GPS1Q13098 491 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 DPYSL3Q14195 570 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 STILQ15468 1287 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 TAZQ16635 292 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 KYNUQ16719 465 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 TIGD5Q53EQ6 642 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 GPRIN1Q7Z2K8 1008 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 ZC3H18Q86VM9 953 aaKnown RBP12.76□□□□□ -0.37
LIN54-206ENST00000506560 UNC45BQ8IWX7 931 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 GRK7Q8WTQ7 553 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 C9orf72Q96LT7 481 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 SNRNP25Q9BV90 132 aaKnown RBP12.76□□□□□ -0.37
LIN54-206ENST00000506560 DDX20Q9UHI6 824 aaKnown RBP12.76□□□□□ -0.37
LIN54-206ENST00000506560 GOLGA8MH3BSY2 632 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 SDC4P31431 198 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 PTPN7P35236 360 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 CETN2P41208 172 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 COPS2P61201 443 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 FASTKD3Q14CZ7 662 aaKnown RBP12.76□□□□□ -0.37
LIN54-206ENST00000506560 MAP3K21Q5TCX8 1036 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 DENND2CQ68D51 928 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 BBS12Q6ZW61 710 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 PSD3Q9NYI0 1048 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 NOD1Q9Y239 953 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 MFHAS1Q9Y4C4 1052 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 TET1Q8NFU7 2136 aa12.76□□□□□ -0.37
LIN54-206ENST00000506560 SYNJ2BP-COX16A0A087WUM0 186 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 GABRDO14764 452 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 GPR182O15218 404 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 PRPSAP2O60256 369 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 RARGP13631 454 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 ITIH2P19823 946 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 NR1D1P20393 614 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 WARSP23381 471 aaKnown RBP12.75□□□□□ -0.37
LIN54-206ENST00000506560 YY1P25490 414 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 PCK1P35558 622 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 MAP3K7CLP57077 242 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 ADCY1Q08828 1119 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 C1orf228Q6PIY5 440 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 CD300LGQ6UXG3 332 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 CLEC20AQ6ZU45 233 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 RTN4RL1Q86UN2 441 aaPredicted RBP12.75□□□□□ -0.37
LIN54-206ENST00000506560 PYROXD2Q8N2H3 581 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 TOP6BLQ8N6T0 577 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 CCDC185Q8N715 623 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 TMEM209Q96SK2 561 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 COX16Q9P0S2 106 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 CTNNAL1Q9UBT7 734 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 ENDOD1O94919 500 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 MAGOHP61326 146 aaKnown RBP12.75□□□□□ -0.37
LIN54-206ENST00000506560 IFI35P80217 286 aaPredicted RBP12.75□□□□□ -0.37
LIN54-206ENST00000506560 DSC3Q14574 896 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 LONRF1Q17RB8 773 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 PPP6R3Q5H9R7 873 aaPredicted RBP12.75□□□□□ -0.37
LIN54-206ENST00000506560 ANKRD22Q5VYY1 191 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 LRRC31Q6UY01 552 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 NKD2Q969F2 451 aaPredicted RBP12.75□□□□□ -0.37
LIN54-206ENST00000506560 FAM149B1Q96BN6 582 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 TBCBQ99426 244 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 RTP3Q9BQQ7 232 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 TRAIPQ9BWF2 469 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 KRT82Q9NSB4 513 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 HOMER3Q9NSC5 361 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 NR2E3Q9Y5X4 410 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 TDRD15B5MCY1 1934 aaKnown RBP12.75□□□□□ -0.37
LIN54-206ENST00000506560 TCRBV7S3A2A0A539 114 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 NRP1O14786 923 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 NUDT17P0C025 328 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 SETSIPP0DME0 302 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 CST5P28325 142 aaPredicted RBP12.75□□□□□ -0.37
LIN54-206ENST00000506560 GNGT1P63211 74 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 UPP1Q16831 310 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 CCDC38Q502W7 563 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 HIBCHQ6NVY1 386 aaPredicted RBP12.75□□□□□ -0.37
LIN54-206ENST00000506560 PQLC3Q8N755 202 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 CCDC89Q8N998 374 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 FAM71DQ8N9W8 422 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 ZMIZ2Q8NF64 920 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 RAET1EQ8TD07 263 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 PCED1BQ96HM7 432 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 FAM124BQ9H5Z6 455 aaPredicted RBP12.75□□□□□ -0.37
LIN54-206ENST00000506560 RSAD1Q9HA92 442 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 LAMA3Q16787 3333 aa12.75□□□□□ -0.37
LIN54-206ENST00000506560 B3GAT3O94766 335 aa12.74□□□□□ -0.37
LIN54-206ENST00000506560 AMHP03971 560 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms