RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MST1P26927 711 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 PPM1FP49593 454 aaPredicted RBP6.94□□□□□ -1.3
HERC4-213ENST00000506515 BCAT1P54687 386 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 ITIH3Q06033 890 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 GPS1Q13098 491 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 SLC5A9Q2M3M2 681 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 LCE1DQ5T752 114 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 ARL6IP4Q66PJ3 421 aaKnown RBP6.94□□□□□ -1.3
HERC4-213ENST00000506515 KRT73Q86Y46 540 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 IZUMO1Q8IYV9 350 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 CACNA2D3Q8IZS8 1091 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 SPATA5Q8NB90 893 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 FAM71BQ8TC56 605 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 LENG9Q96B70 501 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 ZNF503Q96F45 646 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 ZNF668Q96K58 619 aaPredicted RBP6.94□□□□□ -1.3
HERC4-213ENST00000506515 SCLT1Q96NL6 688 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 HIST1H2AAQ96QV6 131 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 PRPF18Q99633 342 aaKnown RBP6.94□□□□□ -1.3
HERC4-213ENST00000506515 C17orf80Q9BSJ5 609 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 MLST8Q9BVC4 326 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 WDR11Q9BZH6 1224 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 MYLK2Q9H1R3 596 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 GRHPRQ9UBQ7 328 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 PCDHGB3Q9Y5G1 929 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 FER1L4A9Z1Z3 1794 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 ADM5C9JUS6 153 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 AGPSO00116 658 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 ACKR2O00590 384 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 ASNA1O43681 348 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 USP1O94782 785 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 VNN1O95497 513 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 CHRM2P08172 466 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 SRGAP2BP0DMP2 458 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 GATMP50440 423 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 PTK2BQ14289 1009 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 LSM12Q3MHD2 195 aaKnown RBP6.93□□□□□ -1.3
HERC4-213ENST00000506515 LY6G5CQ5SRR4 150 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 SLC9A4Q6AI14 798 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 VWA1Q6PCB0 445 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 RHOUQ7L0Q8 258 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 MRGPREQ86SM8 312 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 LNX2Q8N448 690 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 GLG1Q92896 1179 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 GRAMD1AQ96CP6 724 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 Q96MF0 132 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 MAGEH1Q9H213 219 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 SERHL2Q9H4I8 314 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 EPS8L2Q9H6S3 715 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 GLOD4Q9HC38 313 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 AGO4Q9HCK5 861 aaKnown RBP6.93□□□□□ -1.3
HERC4-213ENST00000506515 SCAF8Q9UPN6 1271 aaKnown RBP6.93□□□□□ -1.3
HERC4-213ENST00000506515 USP22Q9UPT9 525 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 HS3ST4Q9Y661 456 aa6.93□□□□□ -1.3
HERC4-213ENST00000506515 DIP2BQ9P265 1576 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 SYT5O00445 386 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 YY2O15391 372 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 SNX2O60749 519 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 ARP10275 920 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 EGR2P11161 476 aaPredicted RBP6.92□□□□□ -1.3
HERC4-213ENST00000506515 EPHA3P29320 983 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 SERPINF1P36955 418 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 MTHFSP49914 203 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 CLCN2P51788 898 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 NXPH1P58417 271 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 NSUN2Q08J23 767 aaKnown RBP eCLIP6.92□□□□□ -1.3
HERC4-213ENST00000506515 TBCCQ15814 346 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 C4orf46Q504U0 113 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 PRR16Q569H4 304 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 MAVSQ7Z434 540 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 DTX2Q86UW9 622 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 C11orf44Q8N8P7 122 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 TRIM63Q969Q1 353 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 FKBP10Q96AY3 582 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 FBXL20Q96IG2 436 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 AIFM2Q9BRQ8 373 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 PAGR1Q9BTK6 254 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 SORBS1Q9BX66 1292 aaKnown RBP6.92□□□□□ -1.3
HERC4-213ENST00000506515 KCTD5Q9NXV2 234 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 LUZP4Q9P127 313 aa6.92□□□□□ -1.3
HERC4-213ENST00000506515 KIAA0586Q9BVV6 1533 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 ADAMTS12P58397 1594 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 TOP2BQ02880 1626 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 A1L4Q6 167 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 PIPSLA2A3N6 862 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 ZAR1LA6NP61 321 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 TLR5O60602 858 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 ATXN1P54253 815 aaKnown RBP6.91□□□□□ -1.3
HERC4-213ENST00000506515 FSTL1Q12841 308 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 RAPGEF1Q13905 1077 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 MIIPQ5JXC2 388 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 ABHD17BQ5VST6 288 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 FNDC7Q5VTL7 733 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 ABLIM2Q6H8Q1 611 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 CLEC9AQ6UXN8 241 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 LDHAL6AQ6ZMR3 332 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 GATAD2AQ86YP4 633 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 RASGRP3Q8IV61 690 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 LCORLQ8N3X6 602 aa6.91□□□□□ -1.3
HERC4-213ENST00000506515 R3HDM4Q96D70 268 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms