RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 HECTD3Q5T447 861 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 SNX30Q5VWJ9 437 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 TXNDC11Q6PKC3 985 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 GPRIN1Q7Z2K8 1008 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 CREBRFQ8IUR6 639 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 PPM1KQ8N3J5 372 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 CNOT6LQ96LI5 555 aaKnown RBP16.42■□□□□ 0.22
MED28-204ENST00000506409 MED15Q96RN5 788 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 PHOX2BQ99453 314 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 DUS2Q9NX74 493 aaKnown RBP16.42■□□□□ 0.22
MED28-204ENST00000506409 SMPD4Q9NXE4 827 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 CPQQ9Y646 472 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 WNT6Q9Y6F9 365 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 HELZP42694 1942 aaKnown RBP16.41■□□□□ 0.22
MED28-204ENST00000506409 PATJQ8NI35 1801 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 OTOL1A6NHN0 477 aaPredicted RBP16.41■□□□□ 0.22
MED28-204ENST00000506409 LEFTY2O00292 366 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 COCHO43405 550 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 ZDHHC11BP0C7U3 371 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 ACO1P21399 889 aaKnown RBP16.41■□□□□ 0.22
MED28-204ENST00000506409 TUBP50607 506 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 TPD52L1Q16890 204 aaPredicted RBP16.41■□□□□ 0.22
MED28-204ENST00000506409 DPCR1Q3MIW9 517 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 ARHGAP17Q68EM7 881 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 CPA6Q8N4T0 437 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 LMO3Q8TAP4 145 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 ATP2A3Q93084 1043 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 LMAN1LQ9HAT1 526 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 TLR8Q9NR97 1041 aaKnown RBP16.41■□□□□ 0.22
MED28-204ENST00000506409 DACH1Q9UI36 760 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 SCML2Q9UQR0 700 aa16.41■□□□□ 0.22
MED28-204ENST00000506409 CYP26A1O43174 497 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 LAMTOR5O43504 91 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 CHRNB1P11230 501 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 CD19P15391 556 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 SLC8A3P57103 927 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 AMPD2Q01433 879 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 LRRC32Q14392 662 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 PON2Q15165 354 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 EML3Q32P44 896 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 SGO2Q562F6 1265 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 TMEM270Q6UE05 265 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 DDX42Q86XP3 938 aaKnown RBP eCLIP16.4■□□□□ 0.22
MED28-204ENST00000506409 UBR7Q8N806 425 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 EHBP1Q8NDI1 1231 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 NACA2Q9H009 215 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 CHRDQ9H2X0 955 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 CCSER2Q9H7U1 834 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 ECT2Q9H8V3 914 aa16.4■□□□□ 0.22
MED28-204ENST00000506409 CACNA1IQ9P0X4 2223 aa16.39■□□□□ 0.22
MED28-204ENST00000506409 PIEZO1Q92508 2521 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 TLR5O60602 858 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
MED28-204ENST00000506409 PGFP49763 221 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 KIF11P52732 1056 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 GCNT1Q02742 428 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 MTAPQ13126 283 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 GOLGA7BQ2TAP0 167 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 RRAGAQ7L523 313 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 ALYREFQ86V81 257 aaKnown RBP16.39■□□□□ 0.21
MED28-204ENST00000506409 KIAA1958Q8N8K9 716 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 ANKRD52Q8NB46 1076 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 GPT2Q8TD30 523 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 KAT5Q92993 513 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 IER2Q9BTL4 223 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 INTS2Q9H0H0 1204 aaKnown RBP16.39■□□□□ 0.21
MED28-204ENST00000506409 LINC00597Q9H2U6 94 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 CFAP97Q9P2B7 532 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 TSPAN16Q9UKR8 245 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 PCDHB4Q9Y5E5 795 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 MYO16Q9Y6X6 1858 aa16.39■□□□□ 0.21
MED28-204ENST00000506409 SLC9A3R1O14745 358 aaPredicted RBP16.38■□□□□ 0.21
MED28-204ENST00000506409 NFATC1O95644 943 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 PAEPP09466 180 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 VDRP11473 427 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 ERCC5P28715 1186 aaPredicted RBP16.38■□□□□ 0.21
MED28-204ENST00000506409 GJA4P35212 333 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 NBL1P41271 181 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 MRE11P49959 708 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 BCAT1P54687 386 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 NR1H3Q13133 447 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 DGKKQ5KSL6 1271 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 PIGZQ86VD9 579 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 TTC30AQ86WT1 665 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 IRF2BP1Q8IU81 584 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 ARHGEF19Q8IW93 802 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 MAML2Q8IZL2 1156 aaPredicted RBP16.38■□□□□ 0.21
MED28-204ENST00000506409 CHFRQ96EP1 664 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 UBXN6Q9BZV1 441 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 THAP9Q9H5L6 903 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 RBM12Q9NTZ6 932 aaKnown RBP16.38■□□□□ 0.21
MED28-204ENST00000506409 HESX1Q9UBX0 185 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 FBXO4Q9UKT5 387 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 KIAA1257Q9ULG3 409 aa16.38■□□□□ 0.21
MED28-204ENST00000506409 A0A1W2PQH9 124 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 O00370 1275 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 SCAMP3O14828 347 aaKnown RBP16.37■□□□□ 0.21
MED28-204ENST00000506409 SP9P0CG40 484 aa16.37■□□□□ 0.21
MED28-204ENST00000506409 MTIF2P46199 727 aaKnown RBP16.37■□□□□ 0.21
MED28-204ENST00000506409 GRSF1Q12849 480 aaKnown RBP eCLIP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms