RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NXPH3O95157 252 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 TTLL1O95922 423 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 ONECUT2O95948 504 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 FAM163BP0C2L3 166 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 YY1P25490 414 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 CYP2C18P33260 490 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 TECP42680 631 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 INHBCP55103 352 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 TIRAPP58753 221 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 TGFB2P61812 414 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 FAXCQ5TGI0 409 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 GGT6Q6P531 493 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 MZT2AQ6P582 158 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 CLEC9AQ6UXN8 241 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 DPY19L3Q6ZPD9 716 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 ZNF551Q7Z340 670 aaPredicted RBP4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 CCDC28AQ8IWP9 274 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 LRRC71Q8N4P6 559 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 C11orf44Q8N8P7 122 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 VN1R3Q9BXE9 311 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 INO80BQ9C086 356 aaPredicted RBP4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 WDR12Q9GZL7 423 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 SLC25A32Q9H2D1 315 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 IKZF4Q9H2S9 585 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 ZBTB26Q9HCK0 441 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 ALG13Q9NP73 1137 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 RGL1Q9NZL6 768 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 SH2B3Q9UQQ2 575 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 LRCH1Q9Y2L9 728 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 DMRT1Q9Y5R6 373 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 COMMD10Q9Y6G5 202 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 KAT6AQ92794 2004 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 F5H423 210 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 AP4M1O00189 453 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 PSMD9O00233 223 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 PODXLO00592 558 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 HNRNPDLO14979 420 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 ADAMTS3O15072 1205 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 SNX2O60749 519 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 EBLN1P0CF75 366 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 IDEP14735 1019 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 NDUFB7P17568 137 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 TYRP1P17643 537 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 ENGP17813 658 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 PCSK6P29122 969 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 TIAL1Q01085 375 aaKnown RBP eCLIP4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 CHAF1AQ13111 956 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 GRM1Q13255 1194 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 FHL3Q13643 280 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 FBXO38Q6PIJ6 1188 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 PCSK4Q6UW60 755 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 PARS2Q7L3T8 475 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 METTL25Q8N6Q8 603 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 CYP2W1Q8TAV3 490 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 MUL1Q969V5 352 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 CHFRQ96EP1 664 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 TMEM41AQ96HV5 264 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 HAPLN3Q96S86 360 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 CRB3Q9BUF7 120 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 SELENOOQ9BVL4 669 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 TTLL2Q9BWV7 592 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 IL17RBQ9NRM6 502 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 DLL3Q9NYJ7 618 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 TMOD4Q9NZQ9 345 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 VPS51Q9UID3 782 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 SLC39A10Q9ULF5 831 aa4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 FNDC1Q4ZHG4 1894 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-204ENST00000505804 EXOC5O00471 708 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 ORC4O43929 436 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 PECAM1P16284 738 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 EGR1P18146 543 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 CTGFP29279 349 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 MTHFSP49914 203 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 CCT8P50990 548 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 STARD3Q14849 445 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 RAB30Q15771 203 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 CYP1B1Q16678 543 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 ERCC6LQ2NKX8 1250 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 PRR16Q569H4 304 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 TMTC4Q5T4D3 741 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 USP17L6PQ6QN14 398 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 Q6ZWC4 215 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 SIMC1Q8NDZ2 872 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 CAGE1Q8TC20 777 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 POF1BQ8WVV4 589 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 RSPRY1Q96DX4 576 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 ZDHHC12Q96GR4 267 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 ZNF668Q96K58 619 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 SORCS2Q96PQ0 1159 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 PRR25Q96S07 402 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 AGAP2Q99490 1192 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 ARPC5LQ9BPX5 153 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 STK33Q9BYT3 514 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 SYNPO2LQ9H987 977 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 DUSP22Q9NRW4 184 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 TM7SF3Q9NS93 570 aa4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 MAGED2Q9UNF1 606 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-204ENST00000505804 SLC27A6Q9Y2P4 619 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms