RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 LILRB5O75023 590 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 MICAL2O94851 1124 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 CALCAP01258 141 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 PAEPP09466 180 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 FAM200BP0CF97 657 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 KLK7P49862 253 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 MFAP3P55082 362 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 USP46P62068 366 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 TAF12Q16514 161 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 ARHGAP44Q17R89 818 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 RSPO4Q2I0M5 234 aaPredicted RBP17.83■□□□□ 0.44
SYNE4-207ENST00000505054 FKBP15Q5T1M5 1219 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 KLHDC7AQ5VTJ3 777 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 ZNF852Q6ZMS4 543 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 CLEC20AQ6ZU45 233 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 TMEM150AQ86TG1 271 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 TFAP2BQ92481 460 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 SHC3Q92529 594 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 MCRS1Q96EZ8 462 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 TRMT2BQ96GJ1 504 aaKnown RBP17.83■□□□□ 0.44
SYNE4-207ENST00000505054 MYRFLQ96LU7 910 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 CEP295NLQ96MC4 621 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 ZSWIM1Q9BR11 485 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 HEBP1Q9NRV9 189 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 DNAJC12Q9UKB3 198 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 MAGED2Q9UNF1 606 aaPredicted RBP17.83■□□□□ 0.44
SYNE4-207ENST00000505054 SIK3Q9Y2K2 1263 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 FHOD1Q9Y613 1164 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 TADA3O75528 432 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 VDRP11473 427 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 CD19P15391 556 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 SDHBP21912 280 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 GABRR2P28476 465 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 MAP3K7CLP57077 242 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 SYCP1Q15431 976 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 TEAD2Q15562 447 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 SGO2Q562F6 1265 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 DENND5BQ6ZUT9 1274 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 FAM81BQ96LP2 452 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 TTLL2Q9BWV7 592 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 NAA15Q9BXJ9 866 aaKnown RBP17.82■□□□□ 0.44
SYNE4-207ENST00000505054 PLA2G2FQ9BZM2 168 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 GANQ9H2C0 597 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 TSPY26PQ9H489 355 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 PLCB1Q9NQ66 1216 aa17.82■□□□□ 0.44
SYNE4-207ENST00000505054 HHLA1C9JL84 531 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 O00370 1275 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 TNFRSF10BO14763 440 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 EPHB6O15197 1021 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 FGF19O95750 216 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 F11P03951 625 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 KRT5P13647 590 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 FCARP24071 287 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 BRD2P25440 801 aaKnown RBP17.81■□□□□ 0.44
SYNE4-207ENST00000505054 ZNF445P59923 1031 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 UBXN1Q04323 297 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 GOLGA7BQ2TAP0 167 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 STXBP5Q5T5C0 1151 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 TANGO2Q6ICL3 276 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 GPRIN1Q7Z2K8 1008 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 TTC30AQ86WT1 665 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 IER2Q9BTL4 223 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 DUSP16Q9BY84 665 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 FAM126AQ9BYI3 521 aaPredicted RBP17.81■□□□□ 0.44
SYNE4-207ENST00000505054 GPR88Q9GZN0 384 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 ATXN3LQ9H3M9 355 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 TSPAN16Q9UKR8 245 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 KIAA1257Q9ULG3 409 aa17.81■□□□□ 0.44
SYNE4-207ENST00000505054 TEX33O43247 280 aa17.8■□□□□ 0.44
SYNE4-207ENST00000505054 PNMA6AP0CW24 399 aaPredicted RBP17.8■□□□□ 0.44
SYNE4-207ENST00000505054 UCHL3P15374 230 aa17.8■□□□□ 0.44
SYNE4-207ENST00000505054 CDC25CP30307 473 aa17.8■□□□□ 0.44
SYNE4-207ENST00000505054 SLC5A3P53794 718 aa17.8■□□□□ 0.44
SYNE4-207ENST00000505054 CYP4F8P98187 520 aa17.8■□□□□ 0.44
SYNE4-207ENST00000505054 NUP93Q8N1F7 819 aa17.8■□□□□ 0.44
SYNE4-207ENST00000505054 SCAMP5Q8TAC9 235 aa17.8■□□□□ 0.44
SYNE4-207ENST00000505054 ZSWIM3Q96MP5 696 aa17.8■□□□□ 0.44
SYNE4-207ENST00000505054 ERGIC2Q96RQ1 377 aa17.8■□□□□ 0.44
SYNE4-207ENST00000505054 ACP6Q9NPH0 428 aa17.8■□□□□ 0.44
SYNE4-207ENST00000505054 RTN4Q9NQC3 1192 aaKnown RBP17.8■□□□□ 0.44
SYNE4-207ENST00000505054 FAM207AQ9NSI2 230 aaPredicted RBP17.8■□□□□ 0.44
SYNE4-207ENST00000505054 UXTQ9UBK9 157 aaPredicted RBP17.8■□□□□ 0.44
SYNE4-207ENST00000505054 F5P12259 2224 aa17.8■□□□□ 0.44
SYNE4-207ENST00000505054 A0A1B0GTH6 734 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 SHISA7A6NL88 538 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 FOXN3O00409 490 aaPredicted RBP17.79■□□□□ 0.44
SYNE4-207ENST00000505054 MAN2B1O00754 1011 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 LMNB2Q03252 620 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 MTAPQ13126 283 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 FZD5Q13467 585 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 RAPGEF1Q13905 1077 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 TSSK4Q6SA08 328 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 LCLAT1Q6UWP7 414 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 ANKRD52Q8NB46 1076 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 NAP1L5Q96NT1 182 aaPredicted RBP17.79■□□□□ 0.44
SYNE4-207ENST00000505054 CHRDQ9H2X0 955 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 BRD9Q9H8M2 597 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 ZFP14Q9HCL3 533 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 PNPLA8Q9NP80 782 aa17.79■□□□□ 0.44
SYNE4-207ENST00000505054 IL37Q9NZH6 218 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms