RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TRIM49P0CI25 452 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 TRIM49CP0CI26 452 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 PDIA4P13667 645 aaKnown RBP13.99□□□□□ -0.17
DDX41-204ENST00000504807 CEACAM1P13688 526 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 TNNC1P63316 161 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 KRT85P78386 507 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 PLCB2Q00722 1185 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 FAM160A1Q05DH4 1040 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 LRRC32Q14392 662 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 EML3Q32P44 896 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 TMEM196Q5HYL7 178 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 VSTM1Q6UX27 236 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 C4orf50Q6ZRC1 276 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 SFTPA1Q8IWL2 248 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 SMYD4Q8IYR2 804 aaPredicted RBP13.99□□□□□ -0.17
DDX41-204ENST00000504807 FSIP1Q8NA03 581 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 B3GALNT2Q8NCR0 500 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 ZMIZ2Q8NF64 920 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 SH3RF2Q8TEC5 729 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 WBP2Q969T9 261 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 C8orf48Q96LL4 319 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 TWNKQ96RR1 684 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 SNX25Q9H3E2 840 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 APOBEC3GQ9HC16 384 aaKnown RBP13.99□□□□□ -0.17
DDX41-204ENST00000504807 MSRB2Q9Y3D2 182 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 TRAV19A0A0A6YYK7 116 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 ZNF840PA6NDX5 716 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 A8MXQ7 604 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 PDXKO00764 312 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 TNFRSF10BO14763 440 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 RHOBTB3O94955 611 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 OLFM2O95897 454 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 CKMP06732 381 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 CHRM1P11229 460 aaPredicted RBP13.98□□□□□ -0.17
DDX41-204ENST00000504807 GJA4P35212 333 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 SYKP43405 635 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 ASPAP45381 313 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 GALK1P51570 392 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 PPP3CAQ08209 521 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 BIRC3Q13489 604 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 NCOA4Q13772 614 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 ZACNQ401N2 412 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 ZCWPW2Q504Y3 356 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 KRBA2Q6ZNG9 492 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 DENND5BQ6ZUT9 1274 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 SV2AQ7L0J3 742 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 PROSER1Q86XN7 944 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 FUKQ8N0W3 1084 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 DEFB124Q8NES8 71 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 SCAMP5Q8TAC9 235 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 EEF2KMTQ96G04 330 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 MSANTD3Q96H12 275 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 KIF9Q9HAQ2 790 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 CGNQ9P2M7 1197 aaKnown RBP13.98□□□□□ -0.17
DDX41-204ENST00000504807 UXTQ9UBK9 157 aaPredicted RBP13.98□□□□□ -0.17
DDX41-204ENST00000504807 TRAF3IP3Q9Y228 551 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 KIAA1549LQ6ZVL6 1849 aa13.98□□□□□ -0.17
DDX41-204ENST00000504807 MYO16Q9Y6X6 1858 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 TRDMT1O14717 391 aaKnown RBP13.97□□□□□ -0.17
DDX41-204ENST00000504807 OAS1P00973 400 aaKnown RBP13.97□□□□□ -0.17
DDX41-204ENST00000504807 USP17L7P0C7H9 530 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 CCDC130P13994 396 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 HDCP19113 662 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 HOXA6P31267 233 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 ATICP31939 592 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 NOP14P78316 857 aaKnown RBP13.97□□□□□ -0.17
DDX41-204ENST00000504807 IFRD2Q12894 506 aaPredicted RBP13.97□□□□□ -0.17
DDX41-204ENST00000504807 TAF10Q12962 218 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 PSMD2Q13200 908 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 TRPC3Q13507 836 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 ZNF699Q32M78 642 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 ACOT1Q86TX2 421 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 FAM35AQ86V20 835 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 OSCP1Q8WVF1 389 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 ERCC4Q92889 916 aaPredicted RBP13.97□□□□□ -0.17
DDX41-204ENST00000504807 SYAP1Q96A49 352 aaPredicted RBP13.97□□□□□ -0.17
DDX41-204ENST00000504807 ZFRQ96KR1 1074 aaKnown RBP13.97□□□□□ -0.17
DDX41-204ENST00000504807 SMOQ99835 787 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 ECT2Q9H8V3 914 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 THG1LQ9NWX6 298 aaKnown RBP13.97□□□□□ -0.17
DDX41-204ENST00000504807 DUS2Q9NX74 493 aaKnown RBP13.97□□□□□ -0.17
DDX41-204ENST00000504807 SMPD4Q9NXE4 827 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 ARHGAP26Q9UNA1 814 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 R3HCC1Q9Y3T6 440 aaKnown RBP13.97□□□□□ -0.17
DDX41-204ENST00000504807 CELSR3Q9NYQ7 3312 aa13.97□□□□□ -0.17
DDX41-204ENST00000504807 ZNF638Q14966 1978 aaKnown RBP13.96□□□□□ -0.17
DDX41-204ENST00000504807 ADAMTS20P59510 1910 aa13.96□□□□□ -0.17
DDX41-204ENST00000504807 A0A1W2PQ27 194 aa13.96□□□□□ -0.17
DDX41-204ENST00000504807 A0A1W2PQ64 194 aa13.96□□□□□ -0.17
DDX41-204ENST00000504807 A0A1W2PQD8 194 aa13.96□□□□□ -0.17
DDX41-204ENST00000504807 LNP1A1A4G5 178 aa13.96□□□□□ -0.17
DDX41-204ENST00000504807 LEFTY2O00292 366 aa13.96□□□□□ -0.17
DDX41-204ENST00000504807 RNF40O75150 1001 aa13.96□□□□□ -0.17
DDX41-204ENST00000504807 PHACTR2O75167 634 aa13.96□□□□□ -0.17
DDX41-204ENST00000504807 ASS1P00966 412 aaKnown RBP13.96□□□□□ -0.17
DDX41-204ENST00000504807 HLA-DRAP01903 254 aa13.96□□□□□ -0.17
DDX41-204ENST00000504807 CSRP1P21291 193 aaKnown RBP13.96□□□□□ -0.17
DDX41-204ENST00000504807 NDST1P52848 882 aa13.96□□□□□ -0.17
DDX41-204ENST00000504807 CREB5Q02930 508 aa13.96□□□□□ -0.17
DDX41-204ENST00000504807 UAP1L1Q3KQV9 507 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms