RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 PAQR9Q6ZVX9 377 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 RSRC2Q7L4I2 434 aaKnown RBP8.22□□□□□ -1.09
SKP2-203ENST00000504386 RALGPS2Q86X27 583 aaPredicted RBP8.22□□□□□ -1.09
SKP2-203ENST00000504386 IRF2BP1Q8IU81 584 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 CPA6Q8N4T0 437 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 C12orf29Q8N999 325 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 MSANTD4Q8NCY6 345 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 STK32AQ8WU08 396 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 RSAD2Q8WXG1 361 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 KCTD13Q8WZ19 329 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 HSFY1Q96LI6 401 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 ZSWIM3Q96MP5 696 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 TWNKQ96RR1 684 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 KCNK16Q96T55 309 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 SMOQ99835 787 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 ARID3AQ99856 593 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 CRACR2AQ9BSW2 395 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 PLCB1Q9NQ66 1216 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 CYLDQ9NQC7 956 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 CNGB3Q9NQW8 809 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 CLIC5Q9NZA1 410 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 TMEM63CQ9P1W3 806 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 TSPAN16Q9UKR8 245 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 ZNF510Q9Y2H8 683 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 NME7Q9Y5B8 376 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 DOCK8Q8NF50 2099 aa8.22□□□□□ -1.09
SKP2-203ENST00000504386 KANSL1LA0AUZ9 987 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 E2F8A0AVK6 867 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 LRRC10BA6NIK2 292 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 GOLGA6L19H0YKK7 550 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 M0QYV0 167 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 O00370 1275 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 RIOK3O14730 519 aaKnown RBP8.21□□□□□ -1.1
SKP2-203ENST00000504386 TLR5O60602 858 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 OLFM2O95897 454 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 ZDHHC11BP0C7U3 371 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 MBL2P11226 248 aaPredicted RBP8.21□□□□□ -1.1
SKP2-203ENST00000504386 AOC1P19801 751 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 PON1P27169 355 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 GNA15P30679 374 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 ATP5C1P36542 298 aaKnown RBP8.21□□□□□ -1.1
SKP2-203ENST00000504386 USP8P40818 1118 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 VIPR2P41587 438 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 ZNF165P49910 485 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 ZNF132P52740 706 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 COG7P83436 770 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 USP4Q13107 963 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 MTA1Q13330 715 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 ORC1Q13415 861 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 LRRC32Q14392 662 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 MTF1Q14872 753 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 E2F5Q15329 346 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 NUDT18Q6ZVK8 323 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 HFE2Q6ZVN8 426 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 RRAGAQ7L523 313 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 TMEM150AQ86TG1 271 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 PIGZQ86VD9 579 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 SYNPOQ8N3V7 929 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 UBR7Q8N806 425 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 ARL14EPQ8N8R7 260 aaPredicted RBP8.21□□□□□ -1.1
SKP2-203ENST00000504386 FLCNQ8NFG4 579 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 FEZF2Q8TBJ5 459 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 IRGQQ8WZA9 623 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 SHC3Q92529 594 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 KHSRPQ92945 711 aaKnown RBP eCLIP8.21□□□□□ -1.13e-6■■□□□ 12.7
SKP2-203ENST00000504386 USP13Q92995 863 aaPredicted RBP8.21□□□□□ -1.1
SKP2-203ENST00000504386 RNF25Q96BH1 459 aaPredicted RBP8.21□□□□□ -1.1
SKP2-203ENST00000504386 IQCDQ96DY2 449 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 PCMTD1Q96MG8 357 aaPredicted RBP8.21□□□□□ -1.1
SKP2-203ENST00000504386 DCLK3Q9C098 648 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 PDCL3Q9H2J4 239 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 TBC1D17Q9HA65 648 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 SAMSN1Q9NSI8 373 aaKnown RBP8.21□□□□□ -1.1
SKP2-203ENST00000504386 DUS2Q9NX74 493 aaKnown RBP8.21□□□□□ -1.1
SKP2-203ENST00000504386 LIMA1Q9UHB6 759 aaKnown RBP8.21□□□□□ -1.1
SKP2-203ENST00000504386 DNMT3LQ9UJW3 386 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 CA14Q9ULX7 337 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.21□□□□□ -1.1
SKP2-203ENST00000504386 SH3BP1Q9Y3L3 701 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 SIT1Q9Y3P8 196 aa8.21□□□□□ -1.1
SKP2-203ENST00000504386 COL6A3P12111 3177 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 FAM86C2PA6NEL3 165 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 LGALS16A8MUM7 142 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 THAP12O43422 761 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 GALR2O43603 387 aaPredicted RBP8.2□□□□□ -1.1
SKP2-203ENST00000504386 NARSO43776 548 aaKnown RBP8.2□□□□□ -1.1
SKP2-203ENST00000504386 TADA3O75528 432 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 PRAMEF12O95522 483 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 ZBED1O96006 694 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 ADH1CP00326 375 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 UCHL3P15374 230 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 KRT9P35527 623 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 RPS9P46781 194 aaKnown RBP8.2□□□□□ -1.1
SKP2-203ENST00000504386 TKTL1P51854 596 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 ZNF445P59923 1031 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 USP46P62068 366 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 GRSF1Q12849 480 aaKnown RBP eCLIP8.2□□□□□ -1.1
SKP2-203ENST00000504386 RAPGEF1Q13905 1077 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 GRM2Q14416 872 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 KRT31Q15323 416 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms