RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CRAMP1Q96RY5 1269 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 MRPL9Q9BYD2 267 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM192AQ9GZU8 254 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ANKRD2Q9GZV1 360 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SEMA6CQ9H3T2 930 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ZCCHC4Q9H5U6 513 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ATP13A3Q9H7F0 1226 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 UCK1Q9HA47 277 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NOP53Q9NZM5 478 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 LARSQ9P2J5 1176 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 VPS51Q9UID3 782 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 MINPP1Q9UNW1 487 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NPHP3-ACAD11A0A0J9YXS1 232 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 EXOC1LA0A1B0GW35 172 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ESYT2A0FGR8 921 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SH3PXD2BA1X283 911 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM221BA6H8Z2 402 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM205CA6NFA0 338 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 A8MU76 341 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 AQP9O43315 295 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 MAP3K7O43318 606 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CYTH3O43739 400 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF862O60290 1169 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ATG13O75143 517 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ALDH1A2O94788 518 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 GDF11O95390 407 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 APOEP02649 317 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ATP1A1P05023 1023 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 EIF2S1P05198 315 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CYP2D6P10635 497 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ESRRAP11474 423 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CCNB1P14635 433 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 MAN2A2P49641 1150 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 RGS19P49795 217 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 LIG4P49917 911 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 TMPRSS15P98073 1019 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ASPHQ12797 758 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 DUSP4Q13115 394 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 GRAPQ13588 217 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CYTH1Q15438 398 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 KCTD19Q17RG1 926 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 KLHL38Q2WGJ6 581 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC44A4Q53GD3 710 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ATF7IP2Q5U623 682 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SCARA5Q6ZMJ2 495 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 RNF111Q6ZNA4 994 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 RAPH1Q70E73 1250 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ZDHHC17Q8IUH5 632 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PASD1Q8IV76 773 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 DMRTC2Q8IXT2 367 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 RNF168Q8IYW5 571 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 RYBPQ8N488 228 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 IPMKQ8NFU5 416 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 LILRB4Q8NHJ6 448 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 GRAPLQ8TC17 118 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SYTL5Q8TDW5 730 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ATL1Q8WXF7 558 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PGBD4Q96DM1 585 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 RAB3IPQ96QF0 476 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 BTBD2Q9BX70 525 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PITPNM3Q9BZ71 974 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 DRC3Q9H069 523 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 NT5C3AQ9H0P0 336 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 OSBPL3Q9H4L5 887 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ARMC7Q9H6L4 198 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CYP4F11Q9HBI6 524 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 COPRSQ9NQ92 184 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 RNF181Q9P0P0 153 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SCHIP1Q9P0W5 487 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 KCNN3Q9UGI6 736 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CHORDC1Q9UHD1 332 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 FBXL5Q9UKA1 691 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PCDHGA10Q9Y5H3 936 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ADGRG1Q9Y653 693 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PASKQ96RG2 1323 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SPEF2Q9C093 1822 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 GOLGA8RI6L899 631 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PDE2AO00408 941 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CAPN9O14815 690 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ZBTB11O95625 1053 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 MMP1P03956 469 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 URODP06132 367 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 HNRNPCP07910 306 aaKnown RBP eCLIP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SNRPAP09012 282 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 GNALP38405 381 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CLK3P49761 638 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SERPINB8P50452 374 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SELENBP1Q13228 472 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CDO1Q16878 200 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SUPT20HL1Q3ZLR7 823 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 LIN52Q52LA3 116 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CGB2Q6NT52 195 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 TRPM8Q7Z2W7 1104 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 JAZF1Q86VZ6 243 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 IFNL1Q8IU54 200 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 Q8N9G6 341 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ACTRT1Q8TDG2 376 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SKA2Q8WVK7 121 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 P3H4Q92791 437 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 REXO5Q96IC2 774 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms