RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 ZNF543Q08ER8 600 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 SPECC1Q5M775 1068 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 FAM160B1Q5W0V3 765 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 KAZNQ674X7 775 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 TAF2Q6P1X5 1199 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 C4orf50Q6ZRC1 276 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 CREBRFQ8IUR6 639 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 TRAPPC12Q8WVT3 735 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 BRI3BPQ8WY22 251 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 NELL1Q92832 810 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 ITM2CQ9NQX7 267 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 CNNM1Q9NRU3 951 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 SLC17A6Q9P2U8 582 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 RAD54BQ9Y620 910 aa5.49□□□□□ -1.53
CPNE4-203ENST00000503204 EIF3FO00303 357 aaPredicted RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 FOXN3O00409 490 aaPredicted RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 FRS3O43559 492 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 VPS4BO75351 444 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 FGF18O76093 207 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 DDX58O95786 925 aaKnown RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 PIM1P11309 404 aaPredicted RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 MYF5P13349 255 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 RPL17P18621 184 aaKnown RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 RAD52P43351 418 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 ARL4CP56559 192 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 SOX8P57073 446 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 FGL2Q14314 439 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 CDC37Q16543 378 aaPredicted RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 KHDC1LQ5JSQ8 128 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 GPATCH4Q5T3I0 446 aaKnown RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 RFX8Q6ZV50 586 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 MAEAQ7L5Y9 396 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 FASTKD5Q7L8L6 764 aaKnown RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 GRASPQ7Z6J2 395 aaPredicted RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 ZNF575Q86XF7 245 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 CACNA2D3Q8IZS8 1091 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 SECISBP2LQ93073 1101 aaKnown RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 APIPQ96GX9 242 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 CENPOQ9BU64 300 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 SMOC2Q9H3U7 446 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 PRDM13Q9H4Q3 707 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 MRPS18AQ9NVS2 196 aaKnown RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 CORO2BQ9UQ03 480 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.48□□□□□ -1.53
CPNE4-203ENST00000503204 PCDHGB2Q9Y5G2 931 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 COX11Q9Y6N1 276 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 NESP48681 1621 aa5.48□□□□□ -1.53
CPNE4-203ENST00000503204 A0A088AWK7 358 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 B4E171 279 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 MGST3O14880 152 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 GFPT2O94808 682 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 CHRM3P20309 590 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 RPS6KB1P23443 525 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 PDIA3P30101 505 aaKnown RBP5.47□□□□□ -1.53
CPNE4-203ENST00000503204 ELF1P32519 619 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 TSPAN7P41732 249 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 GRIA3P42263 894 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 STT3AP46977 705 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 GCLCP48506 637 aaPredicted RBP5.47□□□□□ -1.53
CPNE4-203ENST00000503204 TOB1P50616 345 aaPredicted RBP5.47□□□□□ -1.53
CPNE4-203ENST00000503204 MAPK10P53779 464 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 RAB1AP62820 205 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 TXNRD1Q16881 649 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 RBM20Q5T481 1227 aaKnown RBP5.47□□□□□ -1.53
CPNE4-203ENST00000503204 DPY19L2P1Q6NXN4 242 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 FBXO42Q6P3S6 717 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 APOA5Q6Q788 366 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 RD3Q7Z3Z2 195 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 GALNT5Q7Z7M9 940 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 SYTL1Q8IYJ3 562 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 ZNF527Q8NB42 609 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 FAM46DQ8NEK8 389 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 TFAP2BQ92481 460 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 ZSCAN31Q96LW9 406 aaPredicted RBP5.47□□□□□ -1.53
CPNE4-203ENST00000503204 BBC3Q96PG8 261 aaPredicted RBP5.47□□□□□ -1.53
CPNE4-203ENST00000503204 ALG8Q9BVK2 526 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 TPSD1Q9BZJ3 242 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 R3HDMLQ9H3Y0 253 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 RETREG1Q9H6L5 497 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 KLC4Q9NSK0 619 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 IFT80Q9P2H3 777 aaPredicted RBP5.47□□□□□ -1.53
CPNE4-203ENST00000503204 HESX1Q9UBX0 185 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 PCDHA6Q9UN73 950 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 PLEKHM1Q9Y4G2 1056 aa5.47□□□□□ -1.53
CPNE4-203ENST00000503204 WDR27A2RRH5 827 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 FFAR2O15552 330 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 DNAJB5O75953 348 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 THP07101 528 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 CHRM2P08172 466 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 TSHRP16473 764 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 HDCP19113 662 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 FBLP22087 321 aaKnown RBP5.46□□□□□ -1.54
CPNE4-203ENST00000503204 CD6P30203 668 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 KCNJ5P48544 419 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 HNRNPMP52272 730 aaKnown RBP eCLIP5.46□□□□□ -1.54
CPNE4-203ENST00000503204 ZBED6P86452 979 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 GALNT1Q10472 559 aaPredicted RBP5.46□□□□□ -1.54
CPNE4-203ENST00000503204 STARD3Q14849 445 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 TAF12Q16514 161 aa5.46□□□□□ -1.54
CPNE4-203ENST00000503204 AMOTQ4VCS5 1084 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms