RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 KLK14Q9P0G3 267 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 DRG1Q9Y295 367 aaKnown RBP12.11□□□□□ -0.47
USP46-204ENST00000503060 EFR3BQ9Y2G0 817 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 MRPL42Q9Y6G3 142 aaKnown RBP12.11□□□□□ -0.47
USP46-204ENST00000503060 SMIM28A0A1B0GU29 152 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 E5RJQ4 531 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 CD4P01730 458 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 AKR1A1P14550 325 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 GPD1P21695 349 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 KDELR1P24390 212 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 MIPP30301 263 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 GNALP38405 381 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 VCPP55072 806 aaKnown RBP12.11□□□□□ -0.47
USP46-204ENST00000503060 TAZQ16635 292 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.11□□□□□ -0.47
USP46-204ENST00000503060 PKDCCQ504Y2 493 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 XKR4Q5GH76 650 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 KCNT1Q5JUK3 1230 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 IZUMO3Q5VZ72 239 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 CROCCP2Q86T23 111 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 UNC93AQ86WB7 457 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 C7orf31Q8N865 590 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 TMEM109Q9BVC6 243 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 CDC42EP4Q9H3Q1 356 aaKnown RBP12.11□□□□□ -0.47
USP46-204ENST00000503060 ASNSD1Q9NWL6 643 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 ZNF148Q9UQR1 794 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 TRIP12Q14669 1992 aaPredicted RBP12.11□□□□□ -0.47
USP46-204ENST00000503060 A0A1W2PRQ8 180 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 PIK3R2O00459 728 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 PIRO00625 290 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 KRT38O76015 456 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 RNF8O76064 485 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 TRUB2O95900 331 aaKnown RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 C7P10643 843 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 KCNE1P15382 129 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 MDH1P40925 334 aaKnown RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 ZNF143P52747 638 aaPredicted RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 MAGOHP61326 146 aaKnown RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 GUCY1A3Q02108 690 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 CRHR2Q13324 411 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 OASLQ15646 514 aaKnown RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 SKIDA1Q1XH10 827 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 SOWAHAQ2M3V2 549 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 PRUNE1Q86TP1 453 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 ALLCQ8N6M5 410 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 TRPV1Q8NER1 839 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 APPL2Q8NEU8 664 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 CCHCR1Q8TD31 782 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 NKD2Q969F2 451 aaPredicted RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 HAUS1Q96CS2 278 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 TBC1D31Q96DN5 1066 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 FAM49BQ9NUQ9 324 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 PCSK1NQ9UHG2 260 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 XPO7Q9UIA9 1087 aaKnown RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 PDCD11Q14690 1871 aaKnown RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 MYADML2A6NDP7 307 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 C2CD4BA6NLJ0 364 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 DCDC2CA8MYV0 355 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 XPOTO43592 962 aaKnown RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 DUSP11O75319 330 aaKnown RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 PDGFRBP09619 1106 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 CTGFP29279 349 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 PCK1P35558 622 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 RGS7P49802 495 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 PPP2R2AP63151 447 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 FBXO47Q5MNV8 452 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 TRNP1Q6NT89 227 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 FOXR1Q6PIV2 292 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 OR6B3Q8NGW1 331 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 SLC35B2Q8TB61 432 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 RXFP2Q8WXD0 754 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 TBC1D20Q96BZ9 403 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 PGM2Q96G03 612 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 PIWIL1Q96J94 861 aaKnown RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 ZNF560Q96MR9 790 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 CNPY3Q9BT09 278 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 SLC4A5Q9BY07 1137 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 TRPV5Q9NQA5 729 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 CWC15Q9P013 229 aaKnown RBP12.1□□□□□ -0.47
USP46-204ENST00000503060 IPPQ9Y573 584 aa12.1□□□□□ -0.47
USP46-204ENST00000503060 C6orf222P0C671 652 aaPredicted RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 IRX1P78414 480 aaPredicted RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 P3H1Q32P28 736 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 C6orf118Q5T5N4 469 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 ARHGAP17Q68EM7 881 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 HIBCHQ6NVY1 386 aaPredicted RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 PMF1Q6P1K2 205 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 BBS12Q6ZW61 710 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 GLIS1Q8NBF1 620 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 SMG8Q8ND04 991 aaKnown RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 CMASQ8NFW8 434 aaPredicted RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 DDX23Q9BUQ8 820 aaKnown RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 HESX1Q9UBX0 185 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 SLC12A6Q9UHW9 1150 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 EVLQ9UI08 416 aaPredicted RBP12.09□□□□□ -0.47
USP46-204ENST00000503060 USP18Q9UMW8 372 aa12.09□□□□□ -0.47
USP46-204ENST00000503060 GRXCR2A6NFK2 248 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms