RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 SCML2Q9UQR0 700 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 LEFTY2O00292 366 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 OLFM2O95897 454 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 OAS1P00973 400 aaKnown RBP13.5□□□□□ -0.25
HSPG2-213ENST00000498495 DCNP07585 359 aaKnown RBP13.5□□□□□ -0.25
HSPG2-213ENST00000498495 ZDHHC11BP0C7U3 371 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 KRT5P13647 590 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 EEF1GP26641 437 aaKnown RBP13.5□□□□□ -0.25
HSPG2-213ENST00000498495 PON1P27169 355 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 KIF11P52732 1056 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 BCAT1P54687 386 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 TNK2Q07912 1038 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 RUNX3Q13761 415 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 PDGFRLQ15198 375 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 ZNF77Q15935 545 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 CNGA2Q16280 664 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 ITPRIPL2Q3MIP1 535 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 TCP11X2Q5H9J9 407 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 C1orf228Q6PIY5 440 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 GPRIN1Q7Z2K8 1008 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 PIGZQ86VD9 579 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 TTC30AQ86WT1 665 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 RBBP8NLQ8NC74 664 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-213ENST00000498495 PJA1Q8NG27 643 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 UBA3Q8TBC4 463 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 OSCP1Q8WVF1 389 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 MSANTD3Q96H12 275 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 KREMEN1Q96MU8 473 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 OSBPL6Q9BZF3 934 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 EBF3Q9H4W6 596 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 LRRC4Q9HBW1 653 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 DUS2Q9NX74 493 aaKnown RBP13.5□□□□□ -0.25
HSPG2-213ENST00000498495 SMPD4Q9NXE4 827 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 TMEM63CQ9P1W3 806 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 MTF2Q9Y483 593 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-213ENST00000498495 CPQQ9Y646 472 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 MYH10P35580 1976 aa13.5□□□□□ -0.25
HSPG2-213ENST00000498495 NUP210Q8TEM1 1887 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-213ENST00000498495 ZNF638Q14966 1978 aaKnown RBP13.49□□□□□ -0.25
HSPG2-213ENST00000498495 O00370 1275 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 COCHO43405 550 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-213ENST00000498495 TCF3P15923 654 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 ATP5C1P36542 298 aaKnown RBP13.49□□□□□ -0.25
HSPG2-213ENST00000498495 IFNAR2P48551 515 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 PSEN1P49768 467 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 TUBP50607 506 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 ZXDBP98169 803 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 AMPD2Q01433 879 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 PDE4CQ08493 712 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 BST2Q10589 180 aaKnown RBP13.49□□□□□ -0.25
HSPG2-213ENST00000498495 STILQ15468 1287 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 ARHGAP44Q17R89 818 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 TRIM68Q6AZZ1 485 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 CAVIN1Q6NZI2 390 aaKnown RBP13.49□□□□□ -0.25
HSPG2-213ENST00000498495 GJB7Q6PEY0 223 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 LCLAT1Q6UWP7 414 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 RALGPS2Q86X27 583 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-213ENST00000498495 DDX42Q86XP3 938 aaKnown RBP eCLIP13.49□□□□□ -0.25
HSPG2-213ENST00000498495 DTWD2Q8NBA8 298 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 RIN3Q8TB24 985 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 TFAP2BQ92481 460 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 CCSER2Q9H7U1 834 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 FANCLQ9NW38 375 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 APEX2Q9UBZ4 518 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 NDRG2Q9UN36 371 aaKnown RBP13.49□□□□□ -0.25
HSPG2-213ENST00000498495 USP3Q9Y6I4 520 aa13.49□□□□□ -0.25
HSPG2-213ENST00000498495 OBSL1O75147 1896 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 A0A1W2PQH9 124 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 SPECC1L-ADORA2AF8WAN1 911 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 XPO1O14980 1071 aaKnown RBP13.48□□□□□ -0.25
HSPG2-213ENST00000498495 CYP26A1O43174 497 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 TLR5O60602 858 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 TPM2P07951 284 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 RALAP11233 206 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 RARGP13631 454 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 CDK11BP21127 795 aaKnown RBP13.48□□□□□ -0.25
HSPG2-213ENST00000498495 TARSP26639 723 aaKnown RBP13.48□□□□□ -0.25
HSPG2-213ENST00000498495 USP8P40818 1118 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 SOX9P48436 509 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 PGFP49763 221 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 TKTL1P51854 596 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 USP4Q13107 963 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 NR1H3Q13133 447 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 MIIPQ5JXC2 388 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 C11orf57Q6ZUT1 292 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-213ENST00000498495 CCDC186Q7Z3E2 898 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 CCDC105Q8IYK2 499 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 PRSS33Q8NF86 280 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 NAT10Q9H0A0 1025 aaKnown RBP13.48□□□□□ -0.25
HSPG2-213ENST00000498495 IRF2BPLQ9H1B7 796 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 LINC00597Q9H2U6 94 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 HPS4Q9NQG7 708 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 NAGPAQ9UK23 515 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 DNAJC12Q9UKB3 198 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 CNTN6Q9UQ52 1028 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 SH3BP1Q9Y3L3 701 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 WNT6Q9Y6F9 365 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 ANAPC1Q9H1A4 1944 aa13.48□□□□□ -0.25
HSPG2-213ENST00000498495 SHISA7A6NL88 538 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms