RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 TXNDC8Q6A555 127 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 TMEM270Q6UE05 265 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 VITQ6UXI7 678 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 ENOSF1Q7L5Y1 443 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 MON1AQ86VX9 555 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 ARID3BQ8IVW6 561 aaPredicted RBP11.89□□□□□ -0.51
ERCC8-208ENST00000497892 CMTM8Q8IZV2 173 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 RBBP8NLQ8NC74 664 aaPredicted RBP11.89□□□□□ -0.51
ERCC8-208ENST00000497892 E2F7Q96AV8 911 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 RSPRY1Q96DX4 576 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 FAM81BQ96LP2 452 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 SLITRK1Q96PX8 696 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 PLA2G2FQ9BZM2 168 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 HSD3B7Q9H2F3 369 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 SIX2Q9NPC8 291 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 TAB2Q9NYJ8 693 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 IL37Q9NZH6 218 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 KIAA1257Q9ULG3 409 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 CNTN6Q9UQ52 1028 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 PCDHB4Q9Y5E5 795 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 ZDBF2Q9HCK1 2354 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 TICRRQ7Z2Z1 1910 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 SYCE3A1L190 88 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 FAM86C2PA6NEL3 165 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 TMEM221A6NGB7 291 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 HHLA1C9JL84 531 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 RNF223E7ERA6 249 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 M0R296 226 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 O00370 1275 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 VDRP11473 427 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 CD19P15391 556 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 ZNF18P17022 549 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 YWHAQP27348 245 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 VIPR2P41587 438 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 APBA1Q02410 837 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 TAF10Q12962 218 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 GOLGA7BQ2TAP0 167 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 SKOR2Q2VWA4 1001 aaPredicted RBP11.88□□□□□ -0.51
ERCC8-208ENST00000497892 TMEM31Q5JXX7 168 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 GJB7Q6PEY0 223 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 GPRIN1Q7Z2K8 1008 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 AOPEPQ8N6M6 819 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 MAB21L3Q8N8X9 362 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 PDZD8Q8NEN9 1154 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 SCAMP5Q8TAC9 235 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 DEPDC1BQ8WUY9 529 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 OVCA2Q8WZ82 227 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 DUSP16Q9BY84 665 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 UBE2TQ9NPD8 197 aaPredicted RBP11.88□□□□□ -0.51
ERCC8-208ENST00000497892 COMMD8Q9NX08 183 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 TRPM5Q9NZQ8 1165 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 TSPAN16Q9UKR8 245 aa11.88□□□□□ -0.51
ERCC8-208ENST00000497892 ZNF318Q5VUA4 2279 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 TRAV19A0A0A6YYK7 116 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 ZNF840PA6NDX5 716 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 HEPACAM2A8MVW5 462 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 PRR33A8MZF0 331 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 RNF225M0QZC1 329 aaPredicted RBP11.87□□□□□ -0.51
ERCC8-208ENST00000497892 OLFM2O95897 454 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 PFKLP17858 780 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 PSMC3P17980 439 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 AVPR1AP37288 418 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 PDE6CP51160 858 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 BCAT1P54687 386 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 MFAP3P55082 362 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 GPC5P78333 572 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 FCHO2Q0JRZ9 810 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 IFRD2Q12894 506 aaPredicted RBP11.87□□□□□ -0.51
ERCC8-208ENST00000497892 GRM2Q14416 872 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 ZNF268Q14587 947 aaPredicted RBP11.87□□□□□ -0.51
ERCC8-208ENST00000497892 DPY19L2P1Q6NXN4 242 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 BMP8AQ7Z5Y6 402 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 TTC30AQ86WT1 665 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 MFSD6LQ8IWD5 586 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 CELF5Q8N6W0 485 aaKnown RBP11.87□□□□□ -0.51
ERCC8-208ENST00000497892 ANKRD52Q8NB46 1076 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 TFAP2BQ92481 460 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 SHC3Q92529 594 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 USP13Q92995 863 aaPredicted RBP11.87□□□□□ -0.51
ERCC8-208ENST00000497892 FBXO32Q969P5 355 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 SLC22A12Q96S37 553 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 ZSWIM1Q9BR11 485 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 SMG9Q9H0W8 520 aaKnown RBP11.87□□□□□ -0.51
ERCC8-208ENST00000497892 FBXO44Q9H4M3 255 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 KIF9Q9HAQ2 790 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 TRPC7Q9HCX4 862 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 OBP2AQ9NY56 170 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 WNT16Q9UBV4 365 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 LIMA1Q9UHB6 759 aaKnown RBP11.87□□□□□ -0.51
ERCC8-208ENST00000497892 KMT2EQ8IZD2 1858 aa11.87□□□□□ -0.51
ERCC8-208ENST00000497892 C2orf78A6NCI8 922 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 BECN2A8MW95 431 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 PES1O00541 588 aaKnown RBP11.86□□□□□ -0.51
ERCC8-208ENST00000497892 OAS1P00973 400 aaKnown RBP11.86□□□□□ -0.51
ERCC8-208ENST00000497892 CKMP06732 381 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 TPM2P07951 284 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 USP17L7P0C7H9 530 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 ZDHHC11BP0C7U3 371 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 SETSIPP0DME0 302 aa11.86□□□□□ -0.51
ERCC8-208ENST00000497892 KRT5P13647 590 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms