RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 MARK4Q96L34 752 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 AMNQ9BXJ7 453 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 PNPOQ9NVS9 261 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 STK32BQ9NY57 414 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 SCINQ9Y6U3 715 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 MYH11P35749 1972 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 PRKD1Q15139 912 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 CARTPTQ16568 116 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 PLEKHA7Q6IQ23 1121 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 OGFOD2Q6N063 350 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 FAM71AQ8IYT1 594 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 HACE1Q8IYU2 909 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 ZNF786Q8N393 782 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 NACC1Q96RE7 527 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 SYT11Q9BT88 431 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 NDEL1Q9GZM8 345 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 KCNK4Q9NYG8 393 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 UBAP1Q9NZ09 502 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 TUBGCP4Q9UGJ1 667 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 SERPINB13Q9UIV8 391 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 CDH22Q9UJ99 828 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 TRIM17Q9Y577 477 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 COL16A1Q07092 1604 aaPredicted RBP11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 A0A088AWK7 358 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 TCRBV9S1A1TA0A576 114 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 IPO5O00410 1097 aaKnown RBP11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 ZNF24P17028 368 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 CD300CQ08708 224 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 CDO1Q16878 200 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 EFHC2Q5JST6 749 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 GPATCH4Q5T3I0 446 aaKnown RBP11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 TMEM53Q6P2H8 277 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 SCYL2Q6P3W7 929 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 PLEKHO2Q8TD55 490 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 LZICQ8WZA0 190 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 CASP10Q92851 521 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 CDRT15Q96T59 188 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 MRPL47Q9HD33 250 aaKnown RBP11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 ARHGEF4Q9NR80 690 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 SMYD2Q9NRG4 433 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 TXNDC16Q9P2K2 825 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 DMTF1Q9Y222 760 aa11.02□□□□□ -0.64
TRAPPC12-223ENST00000497597 hCG_1984214I3L0E3 225 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 BUD23O43709 281 aaKnown RBP11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 KDM1AO60341 852 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 SLITRK3O94933 977 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 HLA-DOAP06340 250 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 F7P08709 466 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 RBP3P10745 1247 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 GNA15P30679 374 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 ITGA9Q13797 1035 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 CCNIQ14094 377 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 ABCB5Q2M3G0 1257 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 XKR9Q5GH70 373 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 LDLRAP1Q5SW96 308 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 PDPK2PQ6A1A2 396 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 FOXR2Q6PJQ5 311 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 LAYNQ6UX15 382 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 RNF111Q6ZNA4 994 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 PPIL6Q8IXY8 311 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 PQLC1Q8N2U9 271 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 ZNF713Q8N859 430 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 TSPAN14Q8NG11 270 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 GRIN3AQ8TCU5 1115 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 PRICKLE1Q96MT3 831 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 ACSS3Q9H6R3 686 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 ZC3H7BQ9UGR2 993 aaKnown RBP11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 RSL24D1Q9UHA3 163 aaKnown RBP11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 LOC102724428A0A0B4J2F2 783 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 ARHGEF37A1IGU5 675 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 TMX2-CTNND1H3BSU7 103 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 SNRPAP09012 282 aaKnown RBP11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 CSE1LP55060 971 aaKnown RBP11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 SIK1P57059 783 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 EIF3EP60228 445 aaKnown RBP11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 IL31Q6EBC2 164 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 IGDCC3Q8IVU1 814 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 MYO1HQ8N1T3 1032 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 DEPDC1BQ8WUY9 529 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 MPHOSPH6Q99547 160 aaKnown RBP11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 TMEM79Q9BSE2 394 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 RNPEPQ9H4A4 650 aa11.02□□□□□ -0.65
TRAPPC12-223ENST00000497597 NOL3O60936 208 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 E2F6O75461 281 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 RAD17O75943 681 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 TMEM63AO94886 807 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 EEF1B2P24534 225 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 RPL22P35268 128 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 HALP42357 657 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 ABCG1P45844 678 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 ART3Q13508 389 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 SEZ6Q53EL9 994 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 FASTKD1Q53R41 847 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 TMEM214Q6NUQ4 689 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 SPOCD1Q6ZMY3 1216 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 SLC7A5P1Q8MH63 180 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 ZNF512Q96ME7 567 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms