RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SMIM28A0A1B0GU29 152 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ERICH4A6NGS2 130 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 E5RJQ4 531 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 F8VP50 259 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 APOC4-APOC2K7ER74 178 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 PIRO00625 290 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 DNALI1O14645 258 aaPredicted RBP7.24□□□□□ -1.25
USP39-219ENST00000496047 LIASO43766 372 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 LRCH4O75427 683 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 AGTP01019 485 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 GNRH1P01148 92 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 APOC2P02655 101 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ITGAVP06756 1048 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 THP07101 528 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ODC1P11926 461 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 PDGFRAP16234 1089 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 TGM2P21980 687 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 WARSP23381 471 aaKnown RBP7.24□□□□□ -1.25
USP39-219ENST00000496047 KDELR1P24390 212 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 AKAP5P24588 427 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 CST5P28325 142 aaPredicted RBP7.24□□□□□ -1.25
USP39-219ENST00000496047 PCSK1P29120 753 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ADORA2BP29275 332 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ECHS1P30084 290 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 HOXC8P31273 242 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 CTHP32929 405 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 PHBP35232 272 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 RFC1P35251 1148 aaPredicted RBP7.24□□□□□ -1.25
USP39-219ENST00000496047 GNL1P36915 607 aaPredicted RBP7.24□□□□□ -1.25
USP39-219ENST00000496047 SLC19A1P41440 591 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 GPD2P43304 727 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 KCNJ1P48048 391 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 LHX1P48742 406 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ITGA8P53708 1063 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 CDH6P55285 790 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 GNGT1P63211 74 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 NKX3-2P78367 333 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 SKOR1P84550 965 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 SLC6A3Q01959 620 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ORC1Q13415 861 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ZBTB6Q15916 424 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 NBPF20Q3BBV1 942 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 BOLA3Q53S33 107 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 XKR4Q5GH76 650 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 PPP1R26Q5T8A7 1209 aaPredicted RBP7.24□□□□□ -1.25
USP39-219ENST00000496047 LLGL2Q6P1M3 1020 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 MFSD7Q6UXD7 560 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ALKAL1Q6UXT8 129 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 DSTYKQ6XUX3 929 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 FAM43BQ6ZT52 329 aaPredicted RBP7.24□□□□□ -1.25
USP39-219ENST00000496047 FAM183BPQ6ZVS7 135 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 MICALCLQ6ZW33 695 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 BBS12Q6ZW61 710 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 CENPUQ71F23 418 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 BZW1Q7L1Q6 419 aaKnown RBP7.24□□□□□ -1.25
USP39-219ENST00000496047 ARCQ7LC44 396 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 RPAINQ86UA6 219 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 FAM228AQ86W67 206 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ANKRD52Q8NB46 1076 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 CXorf38Q8TB03 319 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 UBA3Q8TBC4 463 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ATG4AQ8WYN0 398 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 RIN2Q8WYP3 895 aaPredicted RBP7.24□□□□□ -1.25
USP39-219ENST00000496047 HSPH1Q92598 858 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 LENG1Q96BZ8 264 aaPredicted RBP7.24□□□□□ -1.25
USP39-219ENST00000496047 CFAP57Q96MR6 1250 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 UROC1Q96N76 676 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 TWNKQ96RR1 684 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 CALN1Q9BXU9 219 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 TRIM7Q9C029 511 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 PHACTR1Q9C0D0 580 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 NEUROG2Q9H2A3 272 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 LRRC4Q9HBW1 653 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 CHST7Q9NS84 486 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 ZDHHC18Q9NUE0 388 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 FAM49BQ9NUQ9 324 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 FAM105AQ9NUU6 356 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 GRHL1Q9NZI5 618 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 HMGXB4Q9UGU5 601 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 DSEQ9UL01 958 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 NR2E1Q9Y466 385 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 SQORQ9Y6N5 450 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 TCRBV7S2A1N4TA0A589 114 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 SRRM3A6NNA2 597 aaPredicted RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 FAM155AB1AL88 458 aaPredicted RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 ZNF487B1APH4 448 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 PI4K2BG5E9Z4 385 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 APOL1O14791 398 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 XPO1O14980 1071 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 MDM4O15151 490 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 CST8O60676 142 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 STK10O94804 968 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 FBXO21O94952 628 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 GJB6O95452 261 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 TRUB2O95900 331 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 CCNYL3P0C7X3 344 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 FAM200BP0CF97 657 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 RPL9P32969 192 aaKnown RBP7.23□□□□□ -1.25
USP39-219ENST00000496047 SOX11P35716 441 aa7.23□□□□□ -1.25
USP39-219ENST00000496047 ARL4AP40617 200 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms