RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 MUM1Q2TAK8 710 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 INAVAQ3KP66 663 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 RASGRP2Q7LDG7 609 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 KCNK18Q7Z418 384 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 TAX1BP1Q86VP1 789 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 GIMAP8Q8ND71 665 aaPredicted RBP7.43□□□□□ -1.22
VIM-207ENST00000495528 C1orf162Q8NEQ5 155 aaPredicted RBP7.43□□□□□ -1.22
VIM-207ENST00000495528 PPP1R14CQ8TAE6 165 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 MORC4Q8TE76 937 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 TSPEARQ8WU66 669 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 SEZ6LQ9BYH1 1024 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 CERS4Q9HA82 394 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 IFT122Q9HBG6 1241 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 IL17RBQ9NRM6 502 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 ING3Q9NXR8 418 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 NCDNQ9UBB6 729 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 OAZ3Q9UMX2 235 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 STX8Q9UNK0 236 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 MYH8P13535 1937 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 XPOTO43592 962 aaKnown RBP7.42□□□□□ -1.22
VIM-207ENST00000495528 CA3P07451 260 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 MTHFD2P13995 350 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 CR2P20023 1033 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 SLC16A2P36021 539 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 ADCY7P51828 1080 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 PDE1AP54750 535 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 PURAQ00577 322 aaKnown RBP7.42□□□□□ -1.22
VIM-207ENST00000495528 BAATQ14032 418 aaPredicted RBP7.42□□□□□ -1.22
VIM-207ENST00000495528 PCBP2Q15366 365 aaKnown RBP eCLIP7.42□□□□□ -1.22
VIM-207ENST00000495528 DUSP28Q4G0W2 176 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 CCDC178Q5BJE1 867 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 GLB1LQ6UWU2 654 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 DEFB128Q7Z7B8 93 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 PPM1NQ8N819 430 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 LPPQ93052 612 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 FUBP3Q96I24 572 aaKnown RBP eCLIP7.42□□□□□ -1.22
VIM-207ENST00000495528 FAXDC2Q96IV6 333 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 ACE2Q9BYF1 805 aaPredicted RBP7.42□□□□□ -1.22
VIM-207ENST00000495528 NACAP1Q9BZK3 213 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 NAPBQ9H115 298 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 SLC6A15Q9H2J7 730 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 SEC61A2Q9H9S3 476 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 CCPG1Q9ULG6 757 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 MTCH2Q9Y6C9 303 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 TNKSO95271 1327 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 PLIN4Q96Q06 1357 aa7.42□□□□□ -1.22
VIM-207ENST00000495528 MCM3APO60318 1980 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 EPOPA6NHQ4 379 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 TSPY2A6NKD2 308 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 ERC2O15083 957 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 PRAMEF4O60810 478 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 ALDH1A2O94788 518 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 CFBP00751 764 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 ICAM1P05362 532 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 SLC3A2P08195 630 aaKnown RBP7.41□□□□□ -1.22
VIM-207ENST00000495528 MYL3P08590 195 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 IQCF3P0C7M6 154 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 SUPT20HL2P0C7V6 817 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 MX1P20591 662 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 NOVP48745 357 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 ALDH5A1P51649 535 aaPredicted RBP7.41□□□□□ -1.22
VIM-207ENST00000495528 EXOSC10Q01780 885 aaKnown RBP7.41□□□□□ -1.22
VIM-207ENST00000495528 UNC5BQ8IZJ1 945 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 WDR11Q9BZH6 1224 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 RANBP17Q9H2T7 1088 aaKnown RBP7.41□□□□□ -1.22
VIM-207ENST00000495528 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.41□□□□□ -1.22
VIM-207ENST00000495528 GPR45Q9Y5Y3 372 aa7.41□□□□□ -1.22
VIM-207ENST00000495528 A0A1W2PR48 441 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 SLC26A4O43511 780 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 PDGFRBP09619 1106 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 ACTN1P12814 892 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 CCND1P24385 295 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 CALML3P27482 149 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 PLA2G5P39877 138 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 KIR2DL3P43628 341 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 MTNR1BP49286 362 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 CPT1AP50416 773 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 TAP1Q03518 808 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 PLP2Q04941 152 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 AAK1Q2M2I8 961 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 CCDC96Q2M329 555 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 ABHD15Q6UXT9 468 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 CIR1Q86X95 450 aaPredicted RBP7.4□□□□□ -1.22
VIM-207ENST00000495528 GPR135Q8IZ08 494 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 OR6J1Q8NGC5 347 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 PHOSPHO2Q8TCD6 241 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 RILPL2Q969X0 211 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 TMEM176AQ96HP8 235 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 OR14A2Q96R54 314 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 GPHA2Q96T91 129 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 MTG1Q9BT17 334 aaPredicted RBP7.4□□□□□ -1.22
VIM-207ENST00000495528 FSD1Q9BTV5 496 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 EPHX3Q9H6B9 360 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 PCDHGA2Q9Y5H1 932 aa7.4□□□□□ -1.22
VIM-207ENST00000495528 CHD9Q3L8U1 2897 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 FRMPD2Q68DX3 1309 aaPredicted RBP7.39□□□□□ -1.23
VIM-207ENST00000495528 TTC41PQ6P2S7 1318 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 SALL3Q9BXA9 1300 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 GPR42O15529 346 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 PCDHGA12O60330 932 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms